feat: add Alembic database migration system

Implements Alembic for managing token storage database schema versions.
Migrations run automatically on startup with full backward compatibility.

**Changes:**
- Add Alembic dependency (1.14.0+) and SQLAlchemy (auto-installed)
- Create migration infrastructure in alembic/ directory
- Add initial migration (001) capturing current schema
- Modify RefreshTokenStorage.initialize() to run migrations via anyio
- Add CLI commands: db upgrade, current, history, downgrade, migrate
- Add comprehensive migration documentation

**Backward Compatibility:**
- Pre-Alembic databases automatically stamped with revision 001
- No schema changes for existing databases
- Automatic upgrade on first startup after update

**Migration Strategy:**
Three scenarios handled:
1. New database → Run migrations from scratch
2. Pre-Alembic database → Stamp with 001 (no changes)
3. Alembic-managed → Upgrade to latest

**Architecture:**
- Uses anyio.to_thread.run_sync() for structured concurrency
- Alembic env.py runs with anyio.run() in worker thread
- SQLite-friendly migration patterns documented
- No ThreadPoolExecutor needed (anyio handles it)

**CLI Usage:**
```bash
nextcloud-mcp-server db upgrade    # Upgrade to latest
nextcloud-mcp-server db current    # Show version
nextcloud-mcp-server db history    # View changelog
nextcloud-mcp-server db downgrade  # Rollback (with confirmation)
nextcloud-mcp-server db migrate "description"  # Create migration
```

**Testing:**
- All 13 webhook storage tests pass
- New/pre-Alembic database scenarios validated
- anyio integration tested

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
This commit is contained in:
Chris Coutinho
2025-12-18 00:02:09 +01:00
co-authored by Claude Sonnet 4.5
parent a4a34e46a8
commit 3fa376905c
17 changed files with 1436 additions and 152 deletions
@@ -376,16 +376,35 @@ async def oauth_login_callback(request: Request) -> RedirectResponse | HTMLRespo
user_id = f"user-{secrets.token_hex(8)}"
username = "unknown"
# Calculate refresh token expiration from token response
refresh_expires_in = token_data.get("refresh_expires_in")
refresh_expires_at = None
if refresh_expires_in:
import time
refresh_expires_at = int(time.time()) + refresh_expires_in
logger.info(
f"Refresh token expires in {refresh_expires_in}s (at timestamp {refresh_expires_at})"
)
# Extract granted scopes
granted_scopes = (
token_data.get("scope", "").split() if token_data.get("scope") else None
)
# Store refresh token (for background jobs ONLY)
if refresh_token:
logger.info(f"Storing refresh token for user_id: {user_id}")
logger.info(f" State parameter (provisioning_client_id): {state[:16]}...")
logger.info(f" Granted scopes: {granted_scopes}")
logger.info(f" Expires at: {refresh_expires_at}")
await storage.store_refresh_token(
user_id=user_id,
refresh_token=refresh_token,
expires_at=None,
expires_at=refresh_expires_at,
flow_type="browser", # Browser-based login flow
provisioning_client_id=state, # Store state for unified session lookup
scopes=granted_scopes,
)
logger.info(f"✓ Refresh token stored successfully for user_id: {user_id}")
logger.info(