The document processor crash-looped on one pathological PDF: pymupdf4llm's
table/graphics detection over a page with ~1M vector path items ballooned past
the 2 GiB pod limit. The parse ran in a thread, so nothing could interrupt or
memory-bound it -- a single bad file OOM-killed the whole pod.
Run the parse in an isolated worker subprocess (anyio.to_process, cancellable)
with an RLIMIT_AS memory cap and a wall-clock timeout, so a pathological file
fails THAT document instead of the pod (new document_processors/_isolation.py).
Also pass graphics_limit (default 5000) to to_markdown -- validated to cut the
known trigger page from 112 s to 23 s with bounded memory.
On a permanent parse failure the processor returns success=False (instead of
raising, which would retry 3x); vector/processor.py marks the placeholder
"failed" and skips indexing, and the scanner stops re-queuing failed placeholders
until the file changes -- so a doomed file no longer churns.
New per-tenant (per-pod env) settings: DOCUMENT_PDF_GRAPHICS_LIMIT,
DOCUMENT_PARSE_TIMEOUT_SECONDS, DOCUMENT_PARSE_MEM_LIMIT_MB. New metric
astrolabe_document_parse_failed_total{reason=timeout|oom|error} surfaces hard
failures that previously killed the process before any except ran.
First PR of the tiered document-processor effort (Deck #199); tier 0/1/3
pipeline tracked separately.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
The only queue metric, mcp_vector_sync_queue_size, was updated inline by the
single-user consumer (processor_task) but never by the multi-user consumer
(oauth_processor_task). On multi-user tenants (e.g. blackbox-demo, 5 users) the
gauge read 0 for 24h while the live anyio buffer held ~2214 pending documents
(shown by /api/v1/vector-sync/status). The "indexed" figure was also a chunk
count (16039 points ≈ 480 docs) mislabelled as documents.
Publish a consumer-independent snapshot from a periodic task
(vector/metrics_publisher.vector_sync_metrics_task), spawned in BOTH lifespan
task groups (single-user and multi-user) and every queue backend:
- mcp_vector_sync_pending_documents — outstanding work via
ingest_status.get_ingest_pending() (anyio buffer depth or procrastinate
todo+doing); also keeps the legacy queue_size gauge meaningful on all paths.
- mcp_vector_sync_indexed_documents — distinct documents, counted exactly and
cheaply via the one chunk_index=0 point per document (no facet).
- mcp_vector_sync_indexed_chunks — total non-placeholder points.
The /api/v1/vector-sync/status endpoint now returns indexed_documents (distinct
docs) AND indexed_chunks separately, so documents and chunks are no longer
conflated. The publisher uses approximate Qdrant counts (every-N-seconds gauge);
the on-demand endpoint counts exactly. New knob:
VECTOR_SYNC_METRICS_REFRESH_INTERVAL (default 20s). Fail-safe: a metrics refresh
never disturbs ingest.
BREAKING CHANGE: /api/v1/vector-sync/status field `indexed_documents` now holds
the distinct-document count (was the chunk count); the chunk count moved to the
new `indexed_chunks` field. The Astrolabe UI + the nc_get_vector_sync_status MCP
tool / userinfo page are harmonized in a follow-up (Deck #195).
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
The vector-sync scanner expanded a tagged folder into its PDF descendants via
`WebdavClient.find_by_type(scope=dir)` with no result limit. A WebDAV SEARCH
with no `<d:nresults>` returns only Nextcloud's default page (~100 on the
affected instance), so large tagged folders were silently truncated and most
documents were never queued for indexing (e.g. a 220-file folder yielded 100).
Add `search_files_all`, which pages the SEARCH to completion. It uses
`<d:firstresult>` offset paging where supported and, because Nextcloud 31
ignores offset (verified against a live instance), detects the repeated page
and falls back to a single bounded fetch with an explicit large `<d:nresults>`.
`find_all_by_type` wraps this and is now used for tagged-folder expansion;
`find_by_type` is unchanged for the interactive MCP tools.
Crossing `WEBDAV_SEARCH_MAX_RESULTS` logs a warning and increments the new
`astrolabe_document_scan_truncated_total` metric, so a coverage cap can never
again hide files silently.
Scope: this fixes discovery only. Cross-user double-processing of identical
shared files (point-ID collisions) is tracked separately.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Remaining items from the PR #831 Claude review:
- processor span symmetry: add "vector_sync.total_chars" to the sparse
embedding span (already on the dense span) and drop the redundant
"embedding.batch_size" attribute from both spans — it always equalled
vector_sync.chunk_count and would mislead once batching is split.
- metrics: document the deliberate "throughput counts only on full success"
contract in record_document_parse (partial extractions flagged
success=False are counted as a parse-error but never inflate
pages/chars/bytes throughput).
- config: extract _detect_base_provider() -> (family, model) as the single
source of truth for the provider-detection priority chain, shared by
get_embedding_model_name() and get_embedding_provider_family(). Preserves
the intentional gateway asymmetry (only the family method short-circuits).
- base.py: Optional[...] -> PEP 604 `... | None`; drop now-unused import.
Behavior unchanged (get_embedding_* outputs covered by test_config.py).
Refs Deck #175, PR #831.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Reviewer findings:
- Fix double-count of exhausted-retry failures: the inner final-retry branch
and the outer except both recorded a processing error. Consolidate to the
outer handler (single call site); inner branch keeps only the Qdrant-upsert
error metric. Regression test added.
- Deletes are no longer counted as indexing events: the delete success path
drops doc_type so astrolabe_documents_indexed_total is not inflated.
Regression test added.
- Reuse the already-resolved `settings` in _index_document instead of a second
get_settings() call.
- Use explicit `> 0` guards in record_document_parse / record_embedding instead
of truthiness checks.
SonarCloud:
- S1244 (BUG): replace float `==` equality in metric tests with pytest.approx.
- S5332 (hotspot): use https in the gateway-URL test fixture.
- S1192: extract the repeated "vector_sync.chunk_count" span-attribute literal
into a module constant.
Review nit: move the duplicated `_sample` test helper into a shared
`metric_sample` fixture in tests/unit/conftest.py.
Refs Deck #175, PR #831.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Make per-tier bottlenecks in the document-processing pipeline
(scan -> fetch -> parse -> chunk -> embed -> Qdrant upsert) visible via
metrics, traces, and structured logs. Today the document_processors layer
emits only a logger.info line: no metric, no span, and page counts live only
inside a log string. The single processing-duration histogram is unlabeled and
whole-document, so it cannot isolate parse vs embed vs upsert.
New astrolabe_* metric family (distinct from the mcp_* protocol metrics):
- astrolabe_document_parse_{duration_seconds,total} + pages/chars/bytes counters
recorded at the ProcessorRegistry.process() boundary (covers all current and
future processors uniformly)
- astrolabe_document_escalation_total (dormant; tiered-pipeline readiness)
- astrolabe_embedding_{duration_seconds,requests_total,chunks_total,chars_total}
- astrolabe_document_chunks_total, astrolabe_documents_indexed_total{source,status}
Tracing: new document_processor.parse child span + enriched embed/chunk span
attributes (provider/model/batch_size/chunk_count). Structured logs gain a
consistent field vocabulary (doc_id, doc_type, processor, tier, pages, chars,
byte_size, chunks, duration_ms, status) so Loki can aggregate without regex.
Tier-readiness: processor/tier are labels from day one and a tier property is
added to DocumentProcessor, so adding docling/OCR/LLM tiers later is additive
(new label values, never new metrics). Tenant comes from the kube namespace
label; mime_type/model are span attributes only (cardinality). Existing
mcp_vector_sync_*/mcp_qdrant_* are left untouched.
Refs Deck #175 (superset of #173 Phase 2). Dashboard/recording-rules follow-up
tracked on #175 for homelab-argocd.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Many identity providers (AWS Cognito, Okta, Azure AD) reject or mishandle
colons in OAuth scope names. This migrates all custom scopes from
`resource:action` to `resource.action` format (e.g., `notes:read` →
`notes.read`), which is universally accepted and aligns with industry
conventions (Microsoft, Google).
Includes Alembic migration 004 for stored scope strings and ADR-024
documenting the rationale and RFC references.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Enable ruff PLC0415 rule for all source files (tests excluded via
per-file-ignores). Move 136 inline imports to top-level across 33 files.
8 imports suppressed with noqa for legitimate reasons: circular
dependencies (client/__init__.py, context.py), optional dependency
guards (app.py document processors, auth/userinfo_routes.py), and
post-env-setup imports (smithery_main.py).
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Created @instrument_tool decorator for automatic MCP tool metrics collection.
Applied to all 7 tools in notes.py.
Changes:
- observability/metrics.py:
* New instrument_tool() decorator for automatic timing and error tracking
* Compatible with @mcp.tool() and @require_scopes() decorators
* Records tool_name, duration, and success/error status
- server/notes.py:
* Applied @instrument_tool to all 7 tool functions
* nc_notes_create_note, nc_notes_update_note, nc_notes_append_content
* nc_notes_search_notes, nc_notes_get_note, nc_notes_get_attachment
* nc_notes_delete_note
These metrics will populate the MCP Tool Calls dashboard panels.
Part of PR #295 - Complete metrics instrumentation (Phase 5)
Remaining: 86 tools across 8 server files
Security fix: Move Prometheus metrics endpoint from main HTTP port to
dedicated port 9090 to prevent external exposure of metrics data.
Changes:
- Use prometheus_client.start_http_server() for dedicated metrics server
- Remove /metrics route from main application routes
- Metrics now only accessible on port 9090 (configurable via METRICS_PORT)
- Main application port no longer serves /metrics endpoint
This follows security best practice of isolating monitoring endpoints
from application traffic.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude <noreply@anthropic.com>
- Add Prometheus metrics for HTTP, MCP tools, Nextcloud API, OAuth, vector sync, and DB operations
- Add OpenTelemetry distributed tracing with OTLP export
- Add structured JSON logging with trace context correlation
- Add ObservabilityMiddleware for automatic HTTP instrumentation
- Add app_name attribute to all client classes for per-app metrics
- Add configuration for metrics, tracing, and logging via environment variables
- Add documentation in docs/observability.md
- Fix graceful degradation when tracing is disabled (default state)
- Fix uvicorn logging configuration to use observability formatters
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude <noreply@anthropic.com>
