Commit Graph
80 Commits
Author SHA1 Message Date
Chris CoutinhoandClaude Opus 4.7 fec1596784 fix(vector): address PR review round 9 — drop redundant guard, add init lock, test float doc_id path
Addresses the four 🟡 important findings from claude-bot review on PR #773:

str (non-Optional) and the guard would silently skip the Qdrant lookup
for an empty string. Removing the guard matches the type signature.

(`all([…, doc_id, …])` rejects None and empty string, plus
`assert doc_id is not None`). No code change needed.

`get_qdrant_client()` with a module-level `anyio.Lock`. Double-checked
locking keeps the steady-state hot path lock-free. Without this,
parallel cold-start callers could all enter the init block and run
`_backfill_doc_id_to_string` + `_ensure_payload_indexes` redundantly
(idempotent, but noisy). Pattern matches `auth/storage.py:2071`.

behavior with three tests covering the float-warning path (the gap
called out in the review), the str/None silent-skip paths, and the
int-grouping happy path.

Verification:
- ruff check / format: clean
- ty check -- nextcloud_mcp_server: clean
- uv run pytest tests/unit/: 969 passed

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 15:53:33 +02:00
Chris CoutinhoandClaude Opus 4.7 64f0842977 fix(vector): guard _group_int_doc_ids against non-int doc_id values
Skip and warn instead of stringifying floats / unexpected types in the
backfill helper. A stray doc_id=3.0 would otherwise be rewritten to
"3.0", which producers (str(int)) and the keyword index would never
match, and which int() on the verification side would reject. Also add
a doc_id=0 case to the backfill test to guard against a future
falsy-skip regression.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 14:53:12 +02:00
Chris CoutinhoandClaude Opus 4.7 d390b3a4b8 fix(vector): address PR review round 8 — anyio convention + cosine-safe sentinel + dedup get_collection
Reviewer findings (1 blocking + 2 important):

- 🔴 Replace `import asyncio` / `await asyncio.sleep(0)` with
  `import anyio` / `await anyio.sleep(0)` in the four async side-effect
  helpers (_scroll_raises, _upsert_raises, _get_collection_raises,
  _create_index). CLAUDE.md mandates anyio for all async operations;
  conftest pins the backend to asyncio so the asyncio.sleep call worked
  today, but the inconsistency would surface the moment that pin moves.
- 🟡 Replace the sentinel's zero dense vector with a single non-zero
  element (`[1e-9] + [0.0] * (dimension - 1)`). Cosine distance is
  mathematically undefined for the zero vector and Qdrant Cloud strict
  mode rejects zero-vector upserts. The exact value doesn't matter
  (sentinel never participates in a search — no user_id/doc_id/doc_type
  payload) but the upsert itself must be valid.
- 🟡 Avoid the duplicate `get_collection` round-trip on every restart.
  `_ensure_payload_indexes` now accepts an optional
  `existing_schema: dict | None` parameter; when None it fetches
  collection_info itself (and the get_collection-failure swallow still
  applies), but `get_qdrant_client` already fetches collection_info
  for dimension validation in the existing-collection branch — pass
  `collection_info.payload_schema or {}` through to skip the second
  call. The new-collection branch passes `existing_schema={}`
  explicitly since a freshly created collection has no payload schema.

The 🟡 deck_card iteration-fallback finding doesn't apply: the
`isdigit()` guard at context.py:612 returns early before either the
fast-path or the iteration fallback runs, so non-numeric doc_ids
cannot reach the inner `c.id == int(doc_id)` comparison.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 13:48:54 +02:00
Chris CoutinhoandClaude Opus 4.7 d00779ce79 fix(vector): add BOOL index for is_placeholder + correct wait=True docstring
Reviewer feedback (2 items):

- Add a BOOL payload index for `is_placeholder` alongside the three
  KEYWORD fields. Strict-mode index-required filtering on Qdrant Cloud
  enforces a payload index on any field used in a `FieldCondition`
  regardless of value type, so `get_placeholder_filter` and
  `delete_placeholder_point` would have produced HTTP 400 on Cloud
  instances even after this PR's KEYWORD fix.

  Implementation: replace `_KEYWORD_PAYLOAD_FIELDS: tuple` with
  `_PAYLOAD_INDEX_FIELDS: dict[str, PayloadSchemaType]` so each
  field carries its own schema type. Rename
  `_ensure_keyword_payload_indexes` to `_ensure_payload_indexes` since
  the function now creates more than just KEYWORD indexes. The
  per-field log line now includes the schema type
  ("Created KEYWORD payload index on 'doc_id'", "Created BOOL payload
  index on 'is_placeholder'") so operators can tell which type was
  created without checking the source.

- Correct the misleading `wait=True` docstring in
  `_apply_backfill_writes`. The previous wording said
  `_ensure_payload_indexes` runs "immediately after this function",
  but `_apply_backfill_writes` is called in a loop inside
  `_backfill_doc_id_to_string` — the index creation runs after the
  backfill function *returns*, not after each write. Rewrote the
  docstring to capture both load-bearing reasons:
  (1) per-batch commit ordering for crash-recovery safety, and
  (2) ensuring the keyword index built later covers committed
  payloads only.

Adds `test_ensure_payload_indexes_includes_is_placeholder_as_bool`
asserting the schema type is BOOL specifically. Existing tests
updated to use the new dict-based registry (side_effect lists now
extend to all four entries; field-set assertions derive from the
registry instead of hardcoding 3 KEYWORD names).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 13:01:05 +02:00
Chris CoutinhoandClaude Opus 4.7 60a9882c92 fix(vector): address PR review round 6 + SonarCloud findings
Reviewer feedback (3 important + 3 nits):

- Wrap _ensure_keyword_payload_indexes' get_collection() call in
  try/except. The qdrant_client singleton is already assigned by the
  time this function runs, so a transient timeout/DNS failure
  propagating out left the process holding a usable client with the
  migration silently skipped on every subsequent call. Now logs ERROR
  with exc_info and returns; next process restart retries.
- Add `and "doc_id" in point.payload` guard to the four set
  comprehensions in scanner.py (indexed_doc_ids, indexed_file_ids,
  indexed_item_ids, indexed_card_ids). Previously a payload missing
  the doc_id key would raise KeyError and crash the entire scan.
- Tighten test_ensure_keyword_payload_indexes_logs_400_as_warning to
  match the per-field warning prefix exactly (`startswith("Schema
  conflict on payload index")`), so a future change adding 400s to
  the partial-failure summary surfaces here as a count mismatch.
- Add new-collection vs existing-collection context to the
  _backfill_doc_id_to_string docstring's `dimension` parameter.
- Replace the misleading "rewrote 0/N from int to str" wording when
  no rewriting was needed with "N points scanned, none required
  rewriting (collection already in str form)".
- Add test_ensure_keyword_payload_indexes_logs_and_returns_when_
  get_collection_raises mirroring the scroll-failure test.

SonarCloud (1 CRITICAL + 1 MINOR):

- Refactor _backfill_doc_id_to_string to bring cognitive complexity
  under 15 (was 19). Extracted two pure helpers: _group_int_doc_ids
  (group point IDs by stringified doc_id) and _apply_backfill_writes
  (apply set_payload calls and return rewritten count). The main
  function's scroll/loop/sentinel structure is unchanged.
- Add `await asyncio.sleep(0)` to the three async test side_effect
  helpers (_scroll_raises, _upsert_raises, _create_index) so they use
  an actual async feature (S7503). The async-callable shape is still
  required to avoid the AsyncMock unawaited-coroutine warning when
  side_effect raises.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 00:30:29 +02:00
Chris CoutinhoandClaude Opus 4.7 c27556c332 fix(vector): address PR review round 5 — progress logging, summary visibility, sentinel split
Addresses three important findings from the latest reviewer comment:

- Add progress INFO log every 20 scroll batches (≈5120 points at
  batch_size=256) in _backfill_doc_id_to_string so a long-running
  migration on a large collection (50k+ points) doesn't look like a
  startup hang. The line carries collection name, scanned count, and
  rewritten count so it doubles as a heartbeat.
- Track non-400 failures in _ensure_keyword_payload_indexes and emit
  a WARNING summary line listing every field that failed to get an
  index. Per-field ERROR lines are easy to miss in startup noise; the
  summary makes the partial-failure state visible at a glance.
- Split the sentinel upsert out of the data-scroll try/except in
  _backfill_doc_id_to_string. A scroll-time failure still logs ERROR
  with the new "scroll failed" wording (data is incomplete). A
  sentinel-write failure now logs WARNING with "data succeeded but
  sentinel write failed" wording — data is correct, only the
  short-circuit marker is missing, and the next restart re-scrolls
  an already-clean collection (idempotent zero-write) before retrying
  the upsert.

Also fix the RuntimeWarning emitted by
test_backfill_logs_and_returns_when_scroll_raises: replace the bare
`RuntimeError` side_effect with an async-callable side_effect so
AsyncMock awaits the coroutine before the exception propagates.

Three new unit tests cover the new branches:
test_backfill_emits_progress_log_every_20_batches,
test_backfill_logs_warning_when_sentinel_upsert_fails,
test_ensure_keyword_payload_indexes_summarises_failed_fields.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 00:15:56 +02:00
Chris CoutinhoandClaude Opus 4.7 b97ac23228 fix(vector): address PR review round 4 — backfill resilience + degraded-mode docs
- Remove three stale `# Use numeric file ID` / `# Pass file path` comments
  in scanner.py. file_id is already normalized to str() above each call
  site, so the inline comments mislead readers.
- Wrap `_backfill_doc_id_to_string` scroll loop + sentinel upsert in
  try/except Exception. The qdrant_client singleton is assigned before
  this migration runs, so a transient scroll failure was leaving the
  process holding a usable client with int payloads permanently
  unbackfilled until the next restart. Catch broadly, log ERROR with
  exc_info, and return without writing the sentinel — next process
  restart retries from scratch.
- Note `:memory:` mode behavior near the sentinel constants so future
  readers don't read the every-start scroll as a bug.
- Document the two degraded-migration ERROR log signals in
  docs/configuration.md so operators know when a clean restart is
  required to recover indexing.
- Add unit test asserting scroll-time exceptions are logged and swallowed
  without writing the sentinel.

Closes round-4 review feedback on PR #773.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 23:39:37 +02:00
Chris Coutinho 02744a50e0 Merge remote-tracking branch 'origin/master' into fix/qdrant-doc-id-keyword-index 2026-05-08 23:08:39 +02:00
Chris CoutinhoandClaude Opus 4.7 0b004f54bd refactor(vector): address PR #775 review round 3 — fix unused var, harden boundary lookup, rename trace span
- pdf_highlighter.compute_chunk_bboxes_batch: drop unused chunk_text
  destructure (SonarQube finding), and replace positional
  page_boundaries[page_num - 1] with a key-based next() match so
  reordered or non-1-indexed boundaries can't silently shift the bbox.
  Convert touched f-string log to lazy %s formatting.
- vector/processor: rename the trace_operation span from
  "vector_sync.generate_highlights" to "vector_sync.compute_chunk_bboxes"
  to match what the function actually does.
- Add test_compute_chunk_bboxes_handles_unordered_page_boundaries —
  reverses the boundaries list and asserts identical results to the
  in-order case, guarding the boundary-lookup regression class.
- Pin pre-push-review skill to sonnet model.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 23:05:31 +02:00
Chris CoutinhoandClaude Opus 4.7 92b2d50cd7 fix(vector): address PR review round 3 — sentinel guard, skip indexed fields, narrow types
- Add a fixed-UUID sentinel point written after a successful doc_id
  backfill so subsequent restarts retrieve it and short-circuit the
  O(N) scroll. Sentinel has no user_id/doc_id/doc_type payload so
  production search filters never see it.
- Pre-fetch payload_schema in _ensure_keyword_payload_indexes and
  silently skip fields that are already indexed; the "Created KEYWORD
  payload index" INFO log fires only on actual creation.
- Narrow stale `int | str` doc_id annotations to `str` across
  search/verification.py (BatchVerifier return type, per-verifier
  accessible sets, by_type / accessible_by_type / inaccessible
  collections); drop the now-redundant `type(d).__name__` prefix in
  the dropped-docs log.
- Align the backfill log message with the PR description's
  "Running doc_id backfill" promise; add a caller cross-reference to
  the wait=True comment.
- Fix _get_file_path_from_qdrant docstring (file_id is str, not numeric).
- Convert legacy `id=1` to `id="1"` in test_search_result.py to match
  the SearchResult.id: str annotation.

Three new unit tests cover sentinel-found, sentinel-written, and
skip-existing-index branches; existing backfill tests pass dimension
and explicit retrieve.return_value=[] for the no-sentinel path.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 22:59:46 +02:00
Chris CoutinhoandClaude Opus 4.7 8bc87ed37d refactor(vector): address PR #775 review round 2 — drop dead page field, add omission tests
- chunk_bboxes is now dict[int, list[tuple[...]]] holding the bbox list
  directly, not {"bbox": ..., "page": ...}. The page from text-search was
  stored but never read; page_number from offset-based assignment is
  authoritative for the Qdrant payload.
- Add two unit tests for the documented omission contract: chunks whose
  offsets fall outside every page boundary, and chunks whose text cannot
  be located on the rendered page, are silently dropped from the result.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 22:16:50 +02:00
Chris CoutinhoandClaude Opus 4.7 b5b4025bb4 fix(vector): address PR review round 2 — status branching, doc_id guard, doc restore
- _ensure_keyword_payload_indexes: distinguish 400 (schema conflict, warning)
  from other status codes (5xx/network, error) so a transient outage doesn't
  silently leave the collection unindexed.
- build_search_result_from_point: use .get("doc_id") + return None on missing
  instead of KeyError-crashing the search; reverse metadata merge order so
  payload-derived chunk_index/total_chunks win over caller-supplied extras.
- docs/configuration.md: restore the OpenAI/Mistral/Bedrock/Simple provider
  sections + reference-table rows that were dropped in the rebase. Reword
  the "Startup migrations" bullet to describe what the code actually does
  (no sampling — full scroll, zero writes when clean). Add operator note
  about the SemanticSearchResult.id TypeError path.
- tests: pytest.approx for float equality (Sonar python:S1244); coverage
  for non-400 → ERROR, payload={doc_id: None}, and missing doc_id key.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:37:10 +02:00
Chris CoutinhoandClaude Opus 4.7 80b27b1bc6 refactor(vector): address PR #775 review — drop unused payload key, fix resource leaks
- Drop chunk_bbox_page from Qdrant payload — viz endpoints never read it
  (page_number is the canonical PDF page field).
- Bump upsert BATCH_SIZE 10 → 100 now that payloads no longer carry PNGs.
- compute_chunk_bboxes_batch: move doc.close() into finally, replace
  unused stored_page_num with _.
- purge_page_images.py: switch to anyio.run() per project convention,
  and wrap AsyncQdrantClient in try/finally so the aiohttp session is
  always closed (the class doesn't implement async-context-manager).
- Decorate new bbox unit tests with @pytest.mark.unit so they run under
  the fast-feedback selector.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:32:12 +02:00
Chris CoutinhoandClaude Opus 4.7 ee402ea00e feat(vector): replace inline page-image payloads with chunk_bbox (Deck #76)
Per-chunk PDF page renders (~150–700 KB base64 PNG each) were the dominant
disk consumer in production, repeatedly tripping `No space left on device:
WAL buffer size exceeds available disk space` on welcomed-malamute Qdrant.

Replace the inline highlighted_page_image / highlighted_page_number /
highlight_count fields with a small `chunk_bbox` field:
list[(x0, y0, x1, y1)] of normalized [0, 1] floats, ~32 bytes per chunk.
Astrolabe (the only known consumer) renders the highlight client-side as
a percentage-positioned overlay on top of the existing /api/v1/pdf-preview
render-on-demand path (cbcoutinho/astrolabe#76).

- pdf_highlighter: new compute_chunk_bboxes_batch() that reuses the
  existing _find_chunk_bbox text-search path, skipping all pixmap/PIL/PNG
  work.
- processor: store chunk_bbox + chunk_bbox_page in the Qdrant payload,
  drop highlighted_page_image + friends, drop the base64 import.
- visualization /api/v1/chunk-context and auth/viz_routes: read
  chunk_bbox instead of highlighted_page_image.
- vector/__init__: stop eagerly re-exporting `processor`/`scanner` —
  fixes a pre-existing circular import (search.algorithms ->
  vector.placeholder -> vector/__init__ -> processor -> scanner ->
  server.semantic -> search.bm25_hybrid -> search.algorithms partial).
  Test suite that was broken on master (test_bm25_hybrid.py et al.) now
  collects and passes.
- scripts/purge_page_images.py: ad-hoc, idempotent migration that
  delete_payload's the legacy keys from existing points. No reindex
  required; legacy chunks render the page with no overlay.

Pairs with cbcoutinho/astrolabe#76. Frontend handles missing chunk_bbox
gracefully, so this can land in either order.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:16:00 +02:00
Chris CoutinhoandClaude Opus 4.7 6aba589a6e fix(vector): address PR review — wait=True backfill, batched writes, search helper
Addresses reviewer feedback on PR #773:

- Backfill set_payload now uses wait=True to avoid a race where
  _ensure_keyword_payload_indexes builds the KEYWORD index before
  fire-and-forget writes have committed, leaving int payloads
  invisible to filters.
- Batch points sharing the same int doc_id into a single set_payload
  call (one document → many chunks → one round-trip instead of N).
- Drop _has_int_doc_id_sample short-circuit. The sample's false-negative
  window (clean first 256 results, ints further in) is gone; full scroll
  is the dominant cost on first run anyway.
- Simplify _ensure_keyword_payload_indexes: the "already exists" 400
  branch was dead code (Qdrant returns 200 on identical re-create); any
  400 now logs a warning and continues.
- search/context.py: comment the broadened file-type guard. Add explicit
  not doc_id.isdigit() checks at the top of note/news_item/deck_card
  branches in _fetch_document_text so malformed payloads surface as
  warnings instead of being swallowed by the broad except.

Also extracts build_search_result_from_point into search/algorithms.py
to deduplicate the 71-line payload-extraction loop shared by
SemanticSearchAlgorithm and BM25HybridSearchAlgorithm. This fixes
SonarQube's quality-gate failure (4.0% new-code duplication, max 3%).

Test coverage:
- 7 new unit tests for build_search_result_from_point covering missing
  payload, note/file/deck_card metadata, int doc_id coercion, and
  metadata_extras merging.
- Replace _has_int_doc_id_sample tests with clean-collection no-op and
  per-batch grouping tests.
- Update set_payload assertions from wait=False to wait=True.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:14:28 +02:00
Chris CoutinhoandClaude Opus 4.7 719b3b5034 fix(vector): normalize doc_id to str + add Qdrant keyword payload indexes
Production was logging two cascading classes of Qdrant errors against the
welcomed-malamute deployment:

1. HTTP 400 — "Bad request: Index required but not found for \"doc_id\" of
   one of the following types: [keyword]". The collection was created via
   create_collection() with no payload indexes, so any FieldCondition
   filter on doc_id failed at the Qdrant layer (placeholder writes/reads,
   eviction, search context lookups).

2. Compounding the missing index, producers wrote a mix of int and str
   doc_ids: webhook_parser stringified node_id, scanner stringified note
   IDs, news IDs, and deck card IDs — but the file scanner passed the
   numeric file_id through unchanged. A keyword index would not have
   covered both kinds even if it had existed.

This change:

- Normalizes doc_id to str at every producer site (scanner.py:459,
  DocumentTask.doc_id, indexed_*_ids reads from Qdrant).
- Tightens str|int annotations to str across placeholder.py,
  eviction.py, search/verification.py, search/context.py,
  SearchResult.id, and the auth/api visualization endpoints.
- Defensive str() coercion on doc_id reads in semantic.py /
  bm25_hybrid.py / vector/visualization.py for the transition window
  before the backfill runs.
- Adds an idempotent startup migration in get_qdrant_client():
  - _ensure_keyword_payload_indexes creates KEYWORD indexes for
    doc_id, user_id, and doc_type (tolerates "already exists" 400s).
  - _backfill_doc_id_to_string scrolls the collection once and rewrites
    int doc_ids to str. Skipped after a quick sample shows no legacy
    int payloads.
- Public API preserved: SemanticSearchResult.id stays int via explicit
  int(r.id) narrowing in server/semantic.py — surfaces a TypeError with
  actionable context if a future doc_type ships non-numeric ids.
- Documents the startup migration in docs/configuration.md.

Tests: 11 new unit tests in tests/unit/vector/test_qdrant_client.py
covering happy path / already-exists / unrelated-400 for the index
helpers, and sample-skip / mixed-batch rewrite / payload=None edge cases
for the backfill. 889 unit tests pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 19:30:51 +02:00
Chris CoutinhoandClaude Opus 4.7 43c6788555 feat(vector): expand tagged directories for include + apply EXCLUDED_TAGS in scanner
NextcloudClient.find_files_by_tag now mirrors the directory semantics
already used by the exclusion path (issue #710): when a tagged item is
a folder, walk its descendants via WebDAV SEARCH (Depth: infinity) and
include any files matching the MIME filter. Without this, tagging the
root of a corpus with `vector-index` indexed nothing because the tag
applies to the directory only, not to its children.

The vector scanner additionally consults EXCLUDED_TAGS now, so a folder
marked off-limits is skipped even if it (or an ancestor) carries the
include tag — defense-in-depth, matching the "exclusion wins" contract
already enforced by the MCP file tools.

Also addressed a recurring memory-style nit: pre-existing f-string log
lines in find_files_by_tag were converted to lazy %-style.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 00:29:37 +02:00
Chris CoutinhoandClaude Opus 4.7 e8df6003c5 refactor(search): address PR #750 round 6 review feedback
Closes out the remaining nits flagged in the round-6 review.

Critical:
- _verify_files contract comment now enumerates all None-return cases
  (404 + malformed PROPFIND XML) and documents the false-eviction
  trade-off; self-healing via re-indexing recovers
- int(r.id) cast at the SemanticSearchResult boundary now raises a
  TypeError with explicit doc_type/value context instead of bubbling
  up as an opaque "Search failed: ..." McpError

Design observations:
- nc_semantic_search_answer docstring documents the per-note
  round-trip cost from the post-verification race guard
- News verification latency hint added to configuration.md
- SemanticSearchResponse exposes verified_count + dropped_count so
  short result pages on high-ghost-density indexes are
  distinguishable from genuine scarcity. verify_search_results now
  returns (kept, dropped_count); production caller and tests updated

Minor:
- Comment clarifies the .get() fallback in verify_search_results is
  defensive only (run_verifier always populates the entry)
- Eviction task-group guard narrowed from except Exception to
  except RuntimeError (the only documented failure mode of
  TaskGroup.start_soon on a closed group)
- Indexer logs a warning when a deck_card task is missing
  board_id/stack_id, surfacing data-quality issues at index time
  rather than at verification time
- New unit test covers the news verifier's non-numeric-id fail-open
  path (one bad doc_id keeps the entire batch)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:02:27 +02:00
Chris CoutinhoandClaude Opus 4.7 21e5608a39 refactor(search): address PR #750 round 2 review feedback
Implements fire-and-forget eviction (ADR-019 §"Lazy eviction"): the
search response no longer waits on Qdrant deletes, instead spawning
evict() on a long-lived lifespan-owned task group. Falls back to inline
eviction in modes without vector sync and in unit tests.

Also: harden _verify_news_items against non-numeric ids (fail open
instead of crashing the verifier); document the get_file_info None-on-404
contract; add INDEXED_DOC_TYPES single source of truth in vector/scanner.py
referenced by the CI-guard test; write a Verify-on-Read Latency Budget
section in docs/configuration.md covering the unbounded news.get_items
fetch. Closes the two remaining ADR-019 implementation checklist items.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 18:53:32 +02:00
Chris CoutinhoandClaude Opus 4.7 d90e793d19 feat(search): verify-on-read for semantic search results (ADR-019)
The vector index lags Nextcloud (5-min webhook cron + scanner interval),
producing ghost records for deleted/unshared documents until the next
reconciliation. Verify each unique document against Nextcloud at query
time, drop inaccessible results, and lazily evict the corresponding
Qdrant points.

Per-doc_type batch verifiers: notes/files/deck cards run concurrently
per id; news items use a single fetch + intersect to avoid the per-item
fetch-all amplification. Transient errors fail open (keep result, log
warning) — only definitive 4xx drops. Multiple chunks of the same doc
collapse to one verification call.

Wired into nc_semantic_search before the limit trim and before context
expansion. nc_semantic_search_answer's per-note re-fetch retained as a
sub-second race guard since verification now happens upstream.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 07:45:01 +02:00
Chris CoutinhoandClaude Opus 4.7 affe29f72e fix(webhooks): escape webhook_uri, lazy logging, document 401 header omission
Address round-5 reviewer feedback on PR #747:

- Escape `webhook_uri` in the admin pane HTML template so an operator-
  controlled env value (`WEBHOOK_INTERNAL_URL`, `NEXTCLOUD_MCP_SERVER_URL`)
  can't inject markup. The sibling `preset_id` and exception messages were
  already escaped — this one was the odd one out.
- Convert the eight remaining f-string `logger.warning`/`logger.error`
  calls in `api/webhooks.py` to lazy `%s` formatting, matching the style
  already adopted by `webhook_receiver.py` and `webhook_routes.py`.
- Document why the 401 from `handle_nextcloud_webhook` deliberately omits
  `WWW-Authenticate`: NC's webhook delivery worker has no auth-flow state
  machine to negotiate against, the bearer is a static shared secret
  configured out-of-band via `WEBHOOK_SECRET`, and a challenge response
  wouldn't change client behaviour. The existing warning log already
  records the rejection.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-30 14:37:34 +02:00
Chris CoutinhoandClaude Opus 4.7 4a3857aabb fix(webhooks): escape HTML in error responses, compare bearer as bytes
Address the two Security findings from PR review:

- webhook_receiver: encode Authorization header and expected bearer to
  utf-8 bytes before hmac.compare_digest. Conventional form; doesn't
  rely on Python's implicit ASCII encoding.
- webhook_routes: html.escape user-influenced and exception-derived
  strings before interpolating into HTMLResponse content. Covers the
  preset_id path param echoed in the "Unknown preset" branch and the
  str(e) text rendered on handler exceptions.

Adds regression tests verifying compare_digest is invoked on bytes and
that <script> payloads (in preset_id and exception messages) are
emitted as escaped entities, not active markup.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-30 14:17:45 +02:00
Chris CoutinhoandClaude Opus 4.7 c1368b9a7f refactor(webhooks): bound queue waits, route URLs through dynaconf
Addresses round-3 review feedback on PR #747:

- webhook_receiver: wrap send_stream.send() in anyio.fail_after(1.0)
  and return 503 with reason="queue full" if the queue is saturated.
  Avoids pinning the handler until NC's outbound timeout fires; the
  503 retry contract is the same as the existing "sync not running"
  branch.
- webhook_receiver: revise the compare_digest comment to match what
  the function actually guarantees — it avoids the per-character
  short-circuit of `==` but is not fully constant-time across length
  differences.
- _get_webhook_uri: read WEBHOOK_INTERNAL_URL and
  NEXTCLOUD_MCP_SERVER_URL via dynaconf so operators using
  settings.toml (rather than env vars) aren't silently routed into
  the docker/localhost fallback. Adds webhook_internal_url to
  Settings/_DEFAULTS/_field_map; nextcloud_mcp_server_url already
  existed. Docker-detection markers stay on os.getenv since they're
  container-runtime signals, not user-facing config.
- webhook_routes: sweep remaining f-string logger calls to lazy %s
  formatting per CLAUDE.md.
- client/webhooks: modernise full file's type hints to
  dict / list / | None per CLAUDE.md.

Tests:
- New test_returns_503_when_queue_is_full exercises the timeout
  branch with a saturated buffer and a shortened deadline.
- test_webhook_uri tests now patch get_settings (matching the
  auth-pair tests in the same file) instead of monkeypatching env
  vars directly.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-30 04:17:00 +02:00
Chris CoutinhoandClaude Opus 4.7 f5f05b7c84 refactor(webhooks): address PR review on auth-pass
- webhook_receiver: always run hmac.compare_digest (drop the
  `not provided or` short-circuit) so the constant-time path is
  taken regardless of whether the Authorization header is present.
- client/webhooks: modernise the new `auth_data` type hint to
  `dict[str, str] | None` per CLAUDE.md.
- tests/client: rename `test_create_webhook_with_auth_headers` →
  `test_create_webhook_with_static_headers` and use
  `auth_method="header"` (NC's webhook_listeners only supports
  "none" and "header"; the previous "bearer" value was invalid).
- auth/webhook_routes: extract `_register_preset_webhooks` from
  `enable_webhook_preset` so the auth-threading behaviour is
  testable without standing up a Starlette app + auth middleware.
- tests/unit: new test_webhook_routes_register covering the helper
  with secret set / unset, and verifying ids round-trip in order.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-30 04:02:26 +02:00
Chris CoutinhoandClaude Opus 4.7 224428fca5 fix(webhooks): authenticate deliveries via WEBHOOK_SECRET; review nits
Adds optional shared-secret authentication for /webhooks/nextcloud,
addressing the security follow-up flagged in #747.

Behavior:
- WEBHOOK_SECRET set: registrations pass authMethod="header" with
  authData={"Authorization": "Bearer <secret>"} (encrypted at-rest in
  Nextcloud's DB and forwarded on every delivery). The receiver
  validates the same header with hmac.compare_digest before parsing
  any payload; missing/invalid → 401.
- WEBHOOK_SECRET unset: registrations stay on authMethod="none" and
  the receiver accepts unauthenticated POSTs (logging a one-time
  startup warning). Backward compatible — operators can roll out at
  their own pace.

Implementation notes:
- WebhooksClient.create_webhook gains an `auth_data` parameter mapped
  to NC's `authData` body field; this is distinct from the existing
  `headers` parameter (`headers` is plaintext static request headers,
  `authData` is encrypted at-rest in NC and only emitted when
  authMethod="header"). The previous `auth_method="bearer"` mention in
  the docstring was incorrect — NC supports only "none" and "header".
- A small `webhook_auth_pair()` helper in auth/webhook_routes.py
  centralises the secret→(auth_method, auth_data) resolution so the
  preset flow and the Astrolabe-facing /api/v1/webhooks endpoint stay
  in sync.

Also addresses the smaller review points from #747:
- f-string → lazy %s formatting in webhook_receiver.py and
  webhook_routes.py.
- Move `int(time)` inside webhook_parser's try/except so a malformed
  `time` field returns None instead of raising ValueError.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-30 03:50:28 +02:00
Chris CoutinhoandClaude Opus 4.7 2e2a098bee fix(webhooks): wire receiver to vector sync queue and fix registered URI
The /webhooks/nextcloud endpoint was a no-op stub that logged the
payload and returned 200 OK; webhook deletions never reached Qdrant.
Compounding that, _get_webhook_uri() registered the docker-compose
internal hostname (http://mcp:8000) with Nextcloud whenever
/.dockerenv existed — including ECS Fargate — so cloud deployments
were registering a URL NC could not resolve.

- New vector/webhook_parser.py extracts a DocumentTask from
  NodeCreatedEvent / NodeWrittenEvent / BeforeNodeDeletedEvent
  payloads scoped to */files/Notes/*.md (matching the registered
  preset filters).
- New vector/webhook_receiver.py pushes that task onto the same
  send-stream the scanner uses (app.state.document_send_stream),
  with 503 when sync is not running so NC retries delivery.
- _get_webhook_uri() now prefers NEXTCLOUD_MCP_SERVER_URL over the
  /.dockerenv branch, so the explicit public URL set on cloud tasks
  wins; docker-compose dev still falls back to the internal name when
  no public URL is configured.

Calendar / Tables event parsing is intentionally out of scope here.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-30 03:13:50 +02:00
Chris CoutinhoandClaude Opus 4.7 2f1b0d2500 fix(calendar): thread raw credentials to caldav AsyncDAVClient
caldav 3.x lists niquests as a mandatory dependency and prefers it over
httpx. Passing httpx.BasicAuth via the auth= argument breaks under the
niquests backend with "Unexpected non-callable authentication" — see #731.

Switch CalendarClient.__init__ from auth=Auth|None to keyword-only
password/token, and forward them to AsyncDAVClient as password= plus an
explicit auth_type ("basic" or "bearer"). caldav then builds whichever
auth object its active backend needs (niquests.auth.HTTPBasicAuth or
httpx.BasicAuth), so we stay backend-agnostic.

Threaded raw credentials through NextcloudClient — added keyword-only
password/token to its __init__, and updated from_env, from_token, and
the four call sites that build NextcloudClient (context.py basic-auth
and Login Flow paths, auth/userinfo_routes.py, vector/oauth_sync.py).

Four new unit tests pin the construction wiring so the niquests
regression can't recur silently — basic, bearer, no-creds, and
password-precedence cases.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-26 16:52:58 +02:00
Chris CoutinhoandClaude Opus 4.6 29fd0486c9 refactor: change OAuth scope separator from colon to dot for IDP compatibility
Many identity providers (AWS Cognito, Okta, Azure AD) reject or mishandle
colons in OAuth scope names. This migrates all custom scopes from
`resource:action` to `resource.action` format (e.g., `notes:read` →
`notes.read`), which is universally accepted and aligns with industry
conventions (Microsoft, Google).

Includes Alembic migration 004 for stored scope strings and ADR-024
documenting the rationale and RFC references.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-07 10:07:02 +02:00
Chris CoutinhoandClaude Opus 4.6 c21776948d fix: use app password auth for background sync in Login Flow mode
Login Flow v2 is a deployment-wide mode where all users authenticate
with app passwords (not OAuth refresh tokens). Set use_basic_auth=True
when enable_login_flow is true so the background sync user manager
queries the app_passwords table and scanners use app password
authentication for Nextcloud API calls.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-30 00:55:31 +02:00
Chris CoutinhoandClaude Opus 4.6 474cfe5e98 fix: discover Login Flow v2 users in OAuth mode user manager
When enable_login_flow is true, also check the app_passwords table
for provisioned users. Previously, OAuth mode only queried the
refresh_tokens table, missing users who were provisioned via
Login Flow v2 (which stores app passwords, not refresh tokens).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-30 00:48:02 +02:00
Chris CoutinhoandClaude Opus 4.6 a11ae9c027 refactor: enforce PLC0415 (import-outside-top-level) for source code
Enable ruff PLC0415 rule for all source files (tests excluded via
per-file-ignores). Move 136 inline imports to top-level across 33 files.
8 imports suppressed with noqa for legitimate reasons: circular
dependencies (client/__init__.py, context.py), optional dependency
guards (app.py document processors, auth/userinfo_routes.py), and
post-env-setup imports (smithery_main.py).

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-20 08:04:50 +01:00
Chris CoutinhoandClaude Opus 4.6 81efa6e263 fix: address PR #571 review comments
- Move httpx import to top-level and use anyio task group for concurrent
  validation in cleanup_invalid_app_passwords (storage.py)
- Respect Retry-After header for 429 responses, capped at 300s (oauth_sync.py)
- Soften pre-validation exceptions so transient failures don't crash the
  background sync task (oauth_sync.py)
- Replace f-string SQL with blanket DELETE and add returncode checks (conftest.py)
- Extract clear_stale_test_state() helper to deduplicate cleanup logic
  in astrolabe background sync tests

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-20 08:03:55 +01:00
Chris CoutinhoandClaude Opus 4.6 3779ec3e17 fix: resolve stale credentials causing astrolabe background sync test failures
The revoke test failed because it only completed Step 2 (app password) but
not Step 1 (OAuth authorization). In hybrid mode, Astrolabe requires both
steps for $isFullyConfigured=true, which gates the "Revoke Access" button.

Changes:
- Use complete_astrolabe_authorization() in revoke test for full two-step flow
- Add stale state cleanup (app passwords, bruteforce entries, Astrolabe prefs)
  to both enablement and revoke tests
- Add startup cleanup of invalid app passwords in BasicAuth mode
- Pre-validate credentials before entering scanner loop to fail fast
- Handle 401/403/429 in scanner with proper backoff and circuit breaking
- Clean up app passwords in test_users_setup fixture teardown

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-19 15:55:58 +01:00
Chris CoutinhoandClaude Opus 4.5 e486e92f91 fix(auth): Store app passwords locally for multi-user BasicAuth background sync
Previously, the multi-user BasicAuth mode attempted to retrieve app passwords
via OAuth client_credentials grant, which Nextcloud OIDC doesn't support.

This fix implements local storage for app passwords:
- Add app_passwords table via Alembic migration (002)
- Add store/get/delete methods to RefreshTokenStorage
- Add management API endpoints for app password provisioning:
  - POST /api/v1/users/{user_id}/app-password
  - GET /api/v1/users/{user_id}/app-password
  - DELETE /api/v1/users/{user_id}/app-password
- Update oauth_sync.py to read from local storage
- Update Astrolabe to send app passwords to MCP server after validation
- Add app-hook to configure mcp_server_url in Nextcloud

The flow is now:
1. User creates app password in Nextcloud Security settings
2. User enters it in Astrolabe Personal Settings
3. Astrolabe validates against Nextcloud, then sends to MCP server
4. MCP server stores encrypted app password locally
5. Background sync uses locally stored password

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-13 15:44:11 +01:00
Chris Coutinho 056414752e fix(mcp): Move all imports to the top of modules 2025-12-26 10:05:27 -06:00
Chris CoutinhoandClaude Opus 4.5 894bf5f916 refactor(auth): Decouple BasicAuth and OAuth authentication strategies
Completely separates multi-user BasicAuth mode from OAuth mode with no
fallback between them. These are now mutually exclusive authentication
strategies based on deployment configuration.

Changes:
- Create separate functions: get_user_client_basic_auth() and
  get_user_client_oauth() with clear separation of concerns
- Update get_user_client() to dispatch based on use_basic_auth parameter
- Pass use_basic_auth through all background sync tasks
- Update app.py to determine auth mode at startup
- Rewrite integration tests to verify no OAuth fallback in BasicAuth mode
- Fix test assertions for response field names and duplicate title handling

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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-25 08:27:15 -06:00
Chris CoutinhoandClaude Sonnet 4.5 286a3eb20f feat(auth): add multi-user BasicAuth pass-through mode
Implement multi-user BasicAuth pass-through mode (ADR-020) where each
request includes BasicAuth credentials that are forwarded to Nextcloud
APIs without persistent storage.

Changes:
- Add _get_client_from_basic_auth() in context.py to extract credentials
  from Authorization header (set by BasicAuthMiddleware)
- Add AstrolabeClient for app password provisioning via Astrolabe API
- Update oauth_sync.py with dual credential support (app passwords first,
  then refresh tokens as fallback)
- Simplify oauth_tools.py provisioning logic
- Add integration tests for app password provisioning and multi-user BasicAuth

Features:
- Stateless multi-user mode: credentials passed per-request
- Optional background sync via app passwords (stored in Astrolabe)
- Falls back to refresh tokens if app password not available
- Test coverage for provisioning flow and pass-through mode

Related: ADR-019 (Multi-user BasicAuth), ADR-020 (Deployment Modes)

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-20 20:55:31 +01:00
Chris CoutinhoandClaude Sonnet 4.5 e4f3beee01 fix: resolve type checking warnings for CI
- Add type casts for Starlette app state access
- Add assertions for cipher, card, board, stack after initialization
- Add None checks for XML element text attributes
- Handle __package__ being None in tracing setup
- Fix TokenBrokerService initialization to use storage credentials

Resolves 42 type warnings from ty-check, enabling CI linting to pass.

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-18 00:44:58 +01:00
Chris CoutinhoandClaude Opus 4.5 97b48ca3dd feat(astrolabe): add 3D PCA visualization for semantic search
- Add Plotly.js 3D scatter plot showing search results in PCA space
- Create shared visualization.py module to avoid code duplication
- Pass include_pca parameter through API chain to enable coordinates
- Fix OAuth redirects to use /settings/user/astroglobe

The visualization shows document embeddings projected to 3D via PCA,
with the query point highlighted in red. Uses Viridis colorscale
for score visualization, matching the existing vector-viz page.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-18 00:01:09 +01:00
Chris CoutinhoandClaude Opus 4.5 a58a14111b feat(vector-sync): enable background sync in OAuth mode
Add multi-user background vector synchronization when running in OAuth
mode with ENABLE_OFFLINE_ACCESS=true. Key changes:

Architecture (oauth_sync.py):
- User Manager task polls RefreshTokenStorage for provisioned users
- Per-user scanner tasks fetch documents using OAuth tokens
- Shared processor pool indexes documents from all users

Token Broker improvements:
- Accept client_id/client_secret instead of encryption_key
- Remove redundant token audience pre-validation (Nextcloud validates)
- Add _rewrite_token_endpoint for Docker internal URL routing
- Remove double-decryption (storage handles encryption internally)

Browser OAuth flow fixes:
- Add 'resource' parameter to request Nextcloud-scoped tokens
- Store and retrieve next_url for proper redirect after consent
- Rewrite token endpoint URLs for internal Docker access

Configuration:
- Add vector_sync_user_poll_interval setting (default: 60s)

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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-14 20:00:41 +01:00
Chris CoutinhoandClaude Sonnet 4.5 e0320e761c perf(deck): optimize card lookup by storing board_id/stack_id in metadata
Addresses reviewer feedback on PR #395 about O(n²) performance issue.

Changes:
- scanner.py: Add metadata field to DocumentTask with board_id/stack_id
- scanner.py: Populate metadata during deck card scanning (both initial and incremental sync)
- processor.py: Use metadata for O(1) card lookup via get_card() API when available
- processor.py: Fallback to iteration for legacy data without metadata
- context.py: Add _get_deck_metadata_from_qdrant() helper to retrieve metadata from Qdrant
- context.py: Use metadata for fast path lookup in chunk context expansion
- context.py: Add user_id parameter to _fetch_document_text() for metadata retrieval

Performance Impact:
- Before: O(boards × stacks × cards) iteration for each card lookup
- After: O(1) direct API call using stored board_id/stack_id
- Graceful degradation: Falls back to iteration for legacy data

Testing:
- All existing integration tests pass (test_deck_vector_search.py)
- Type checking passes with no new errors

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-14 00:23:12 +01:00
Chris CoutinhoandClaude Sonnet 4.5 20404cf3f2 feat(vector): add Deck card vector search with visualization support
Adds comprehensive vector search support for Nextcloud Deck cards,
including semantic search indexing, chunk preview in the vector viz UI,
and proper deep linking to cards.

**Vector Search Indexing**
- Add deck_card scanning in scanner.py (scan_deck_cards function)
- Index cards from non-archived, non-deleted boards
- Store metadata: board_id, board_title, stack_id, stack_title, card_type, duedate, owner
- Content structure: title + "\n\n" + description (matches indexing format)
- Incremental sync based on lastModified timestamp
- Deletion tracking with grace period

**Vector Visualization Support**
- Add deck_card handler in context.py for chunk preview expansion
- Include board_id in search result metadata (bm25_hybrid.py, semantic.py)
- Expose metadata in viz_routes.py JSON responses
- Update vector-viz.js to construct proper Deck URLs: /apps/deck/board/{board_id}/card/{card_id}
- Update vector_viz.html filter label from "Deck" to "Deck Cards"

**Bug Fixes**
- Skip soft-deleted boards (deletedAt > 0) to prevent 403 Forbidden errors
- Applies to scanner, processor, and context expansion code paths
- Deck API returns deleted boards but rejects stack access with 403

**Testing**
- Add integration tests in test_deck_vector_search.py:
  - test_deck_card_semantic_search: Filtered search with doc_type="deck_card"
  - test_deck_card_appears_in_cross_app_search: Cross-app search includes deck cards
  - test_deck_card_chunk_context: Chunk context fetching for viz preview

**Documentation**
- Update README.md: Add Deck cards to semantic search feature list
- Update semantic-search-architecture.md: Document deck_card support
- Update nc_semantic_search tool documentation

**Type Safety**
- Fix type narrowing for page_boundaries (could be None) using cast()
- Fix scanner.py payload None check for type safety

Resolves vector search for Deck cards across indexing, search, and visualization.

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-13 23:51:18 +01:00
Chris CoutinhoandClaude Sonnet 4.5 3f06e2ee77 fix: resolve all type checking errors (8 errors fixed)
Fixed 8 type checker errors across the codebase:

- vector/scanner.py: Handle None scroll results with null-safe iteration
- search/{bm25_hybrid,semantic}.py: Add None checks for result.payload
- auth/{unified_verifier,webhook_routes}.py: Assert non-None auth credentials
- client/webdav.py: Add None checks before int() conversions
- providers/openai.py: Assert embedding_model is not None
- search/algorithms.py: Explicitly type doc_types set and cast values
- observability/logging_config.py: Match parent class signature (log_data)

Also fixed test_create_tag_creates_system_tag to match WebDAV implementation
(was testing OCS API endpoint, now tests correct WebDAV endpoint with
Content-Location header).

Type checker: 0 errors (down from 8), 20 warnings (ignored)
Tests: All 192 unit tests passing

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-08 01:09:02 +01:00
Chris CoutinhoandClaude a5cb6e1242 refactor(news): simplify vector sync to fetch all items
Remove the complex starred+unread filtering logic in scan_news_items().
The News app's auto-purge feature (default: 200 items per feed) already
limits the total number of items, making explicit filtering unnecessary.

Changes:
- Replace two API calls (starred + unread) with single all-items call
- Remove deduplication logic that merged both lists
- Update docstring to explain the simpler approach

This reduces code complexity while maintaining the same effective coverage.

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Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-29 15:05:34 +01:00
Chris CoutinhoandClaude a33f6a2f15 feat(news): add Nextcloud News app integration
Add full integration for the Nextcloud News (RSS/Atom reader) app:

- Add NewsClient with complete CRUD operations for folders, feeds, and items
- Add 8 read-only MCP tools for listing/getting folders, feeds, items
- Add Pydantic models for News entities with camelCase alias support
- Add vector sync support for starred + unread items
- Add HTML to Markdown converter using markdownify for better embeddings
- Add Docker post-install hook to enable News app
- Add 25 unit tests for NewsClient API methods

Vector sync indexes starred and unread items, providing a balanced approach
that captures important (starred) and current (unread) content without
indexing the entire article history.

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Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-29 14:39:31 +01:00
Chris CoutinhoandClaude 208365cd3d feat: Add OpenAI provider support for embeddings and generation
Adds OpenAI provider to the unified provider architecture (ADR-015),
supporting:
- OpenAI API (api.openai.com)
- GitHub Models API (models.github.ai/inference)
- OpenAI-compatible endpoints (Fireworks, Together, etc.)

Features:
- Embedding support with text-embedding-3-small/large models
- Text generation via chat completions API
- Automatic retry with exponential backoff for rate limits
- Provider auto-detection in registry (priority after Bedrock)

Environment variables:
- OPENAI_API_KEY: API key (required)
- OPENAI_BASE_URL: Base URL override (optional)
- OPENAI_EMBEDDING_MODEL: Embedding model (default: text-embedding-3-small)
- OPENAI_GENERATION_MODEL: Generation model (default: gpt-4o-mini)

Also adds:
- Integration tests for RAG pipeline with MCP sampling
- MCP client sampling support for integration tests
- Ground truth Q&A pairs for Nextcloud User Manual

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Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-23 00:33:32 +01:00
Chris CoutinhoandClaude fffe483c02 fix: Centralize PDF processing and generate separate images per chunk
Previously, pymupdf4llm.to_markdown() was called twice - once in
PyMuPDFProcessor during indexing and again in PDFHighlighter during
visualization. Different image path lengths caused different character
offsets, leading to highlighted pages not matching their chunks.

Also fixed issue where all chunks on the same page showed all highlights
instead of just their own highlight. Now restores original page contents
between chunks using xref stream caching.

Changes:
- Add PDFHighlighter class requiring pre-computed page_boundaries and
  full_text from document processor (no fallback extraction)
- Pass pre-computed data from processor to highlighter
- Extract page-relative portion of chunk text for cross-page chunks
- Add bounding box highlighting using text anchor search
- Run highlight generation in parallel with embedding/BM25
- Cache and restore page contents to isolate highlights per chunk

Results: Highlighting success rate improved from 51% to 95% (121/128).

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-22 02:46:30 +01:00
Chris Coutinho a62a007c87 feat: Add context expansion to semantic search with chunk overlap removal
Implements optional context expansion for semantic search results that
fetches adjacent chunks (N-1 and N+1) from Qdrant to provide before/after
context. Removes configurable chunk overlap (default 200 chars) to avoid
duplicate text appearing in both context and excerpt.

Key changes:
- Add include_context and context_chars parameters to nc_semantic_search
  and nc_semantic_search_answer tools
- Implement Qdrant cache fast path for chunk retrieval (avoids re-fetching
  and re-parsing documents, especially important for PDFs)
- Add _get_chunk_by_index_from_qdrant() to fetch adjacent chunks
- Remove chunk overlap from before_context (last N chars) and after_context
  (first N chars) to prevent duplicate text
- Fetch context in parallel with anyio.Semaphore (max 20 concurrent)
- Pass through page_number from SearchResult to SemanticSearchResult
- Remove document-level deduplication (keep chunk-level dedup from algorithm)

Context expansion is opt-in via include_context=true parameter. When enabled:
- Populates has_context_expansion, marked_text, before_context, after_context
- Adds truncation flags when context exceeds context_chars limit
- Falls back to document fetch for legacy data with truncated excerpts

Related: nextcloud_mcp_server/search/context.py:87-382,
         nextcloud_mcp_server/server/semantic.py:161-255
2025-11-21 01:02:22 +01:00
Chris Coutinho 5a251a99e6 fix: Set is_placeholder=False in processor to fix search filtering
The processor was not setting is_placeholder field when writing real
document chunks to Qdrant. This caused the placeholder filter to exclude
all documents (since None != False), resulting in 0 search results.

Now explicitly sets is_placeholder: False in payload when writing real
indexed chunks, allowing search filters to correctly distinguish between
placeholders and real documents.
2025-11-20 17:15:19 +01:00
Chris Coutinho ec2c274cd9 fix: Increase placeholder staleness threshold to 5x scan interval
- Changed from 2x (120s) to 5x (300s) scan interval
- Large PDFs take 3-4 minutes to process, need longer threshold
- Prevents premature requeuing of in-flight documents
2025-11-20 15:36:49 +01:00