Commit Graph
74 Commits
Author SHA1 Message Date
Chris CoutinhoandClaude Opus 4.7 8f4f5c0079 fix(vector): address PR review round 16 — type-aware index check, comments
Detect pre-existing payload indexes with the wrong schema type in
`_ensure_payload_indexes`. The previous "field already in
existing_schema → skip" branch silently survived a collection migrated
from the int-doc_id era where `doc_id` is indexed as INTEGER, letting
`MatchValue(value="123")` searches keep failing with HTTP 400 on Qdrant
Cloud strict mode — exactly the production failure this PR was meant to
fix. New behaviour: compare `existing_schema[field].data_type` against
the declared type; on mismatch log a WARNING and append to
`failed_fields` so the consolidated end-of-function summary picks it up.
No auto-repair (operator intervention only — see docs/configuration.md
recovery procedure). New test exercises the doc_id-INTEGER scenario
end-to-end and asserts both the per-field WARNING and the summary line.

Clarify the `_verify_news_items` malformed-doc_id rationale: the news
API has no per-item endpoint, so a malformed doc_id genuinely cannot be
verified against the source of truth. We err toward false-positive
(keep) over false-negative (drop) — same conservative posture as
`_verify_notes` and `_verify_deck_cards`. The producer-side validation
is the real security boundary; the verifier is defence-in-depth. Both
the inline comment and the WARNING message now spell this out.

Add a TODO in `get_last_indexed_timestamp` flagging the O(N) cost on
every incremental sync tick. The previous single-page `limit=10_000`
silently bounded the scroll; paginating fixed correctness but made the
unbounded cost visible. The follow-up tracker (canonical TODO at
`api/visualization.py`) covers migrating the max-`indexed_at` to a
sentinel point or collection metadata for O(1) lookup.

Consolidate the duplicate non-numeric-doc_type TODOs at
`api/visualization.py:508` and `auth/viz_routes.py:570` into a single
canonical comment in `visualization.py`; `viz_routes.py` is reduced to
a back-reference. Removes the rot risk of "fixed in one place,
forgotten in the other." The canonical comment also references the
O(1) timestamp follow-up in `scanner.py`.

Document the `batch_size = 256` (qdrant_client.py) vs
`_DELETION_TRACKING_PAGE_SIZE = 1024` (scanner.py) split with
cross-referencing comments at each site: the smaller batch is for the
read-write backfill upsert path (Qdrant accepts ~256-point chunks
comfortably); the larger page is for read-only deletion-tracking
scrolls where no per-page write round-trip applies.

Replace `assert qdrant_client is not None` in `scan_user_documents`
with `cast(AsyncQdrantClient, qdrant_client)` plus an explanatory
comment. `assert` is silently elided under `-O`; `cast` is the
conventional zero-cost narrower for branches the type checker can't
infer from the surrounding `if not initial_sync` ternary.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-10 17:50:23 +02:00
Chris CoutinhoandClaude Opus 4.7 68506f96c5 fix(vector): address PR review round 15 — concurrency, pagination, stale coercion
Defer publication of `_qdrant_client` until after the in-lock backfill +
payload-index migration awaits complete. The fast-path check at the top of
`get_qdrant_client` reads the singleton without holding the init lock, so
publishing the constructed-but-unmigrated client let concurrent fast-path
callers fire filtered searches before `_ensure_payload_indexes` ran —
producing HTTP 400 ("Index required but not found") on Qdrant Cloud strict
mode. Local `provisional` is now used for every await inside the lock; the
global is assigned exactly once, last.

Replace the five hand-rolled `scroll(..., limit=10000)` calls in
`vector/scanner.py` (notes / files / news / deck-cards deletion tracking,
plus the timestamp scroll) with a single paginated `_scroll_all_points`
helper. The previous single-page cap silently dropped deletion-tracking
points beyond the first 10 k for any user past that threshold. Pagination
follows Qdrant's documented contract (loop until `next_page_offset is
None`) with a fixed per-page `_DELETION_TRACKING_PAGE_SIZE = 1024`.

Extract `_create_one_payload_index` from `_ensure_payload_indexes` to drop
its cognitive complexity below the SonarQube limit (17 → ≤ 15) without
losing the per-field error-containment rationale; every comment is
preserved verbatim on the helper.

Drop the stale `SearchResult.id` `int | str` comment and the redundant
`str(d)` coercion in `_verify_news_items` — the contract has been
str-only since the producer-side stringification landed earlier in this
PR.

Fix eight `doc_id=<int>` test calls in `test_chunk_context_offset_gate.py`
that violated the `doc_id: str` signature of `get_chunk_with_context`,
plus align `_make_result` in `test_verification.py` to coerce `id=str(...)`
matching the production contract — and update 30+ assertions from int
sets (`{1, 2, 3}`) to str sets (`{"1", "2", "3"}`) so the tests now model
the post-PR `SearchResult.id: str` reality end-to-end. Previously these
were masked by the `str(d)` coercion now removed from production.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-10 13:49:17 +02:00
Chris CoutinhoandClaude Opus 4.7 c5020d9629 fix(vector): address PR review round 14 — accurate offset-skip comment + news_item doc_id guard
Round-14 review surfaced one blocking and one important issue.

context.py: the comment justifying `skip_offset_lookup` claimed
chunk_start/end_offset weren't in _PAYLOAD_INDEX_FIELDS — round 13
indexed both as INTEGER, so the comment now actively misleads. Replace
with the real reason: an indexed chunk_index miss is canonical (both
paths hit the same Qdrant collection), and skipping the offset filter
avoids a redundant round-trip.

verification.py: hoist an is_valid_nextcloud_doc_id guard before the
`int(d)` cast in _verify_news_items, mirroring the boundary-validation
pattern already in _fetch_document_text. Coerce via `str(d)` because
SearchResult.id is `int | str` (D1 forward-compat widening). Malformed
ids now surface as a logger.warning rather than a generic debug line;
fail-open semantics are preserved.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-10 11:50:46 +02:00
Chris CoutinhoandClaude Opus 4.7 f9ad7dc52e fix(vector): address PR review round 12 — bool guard + strict doc_id validation
- _group_int_doc_ids: use type(value) is not int instead of isinstance,
  since bool is an int subclass and would otherwise stringify to
  "True"/"False" and corrupt legacy payloads on backfill.
- Replace doc_id.isdigit() guards in 5 boundary sites
  (api/visualization, auth/viz_routes, search/context note/news_item/
  deck_card branches) with a shared is_valid_nextcloud_doc_id helper
  that rejects "0", leading zeros, and Unicode digit classes
  (superscripts, Arabic-Indic, Devanagari) which pass isdigit() but
  cannot be valid MySQL AUTO_INCREMENT IDs.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 20:28:47 +02:00
Chris CoutinhoandClaude Opus 4.7 f3ce46da0f fix(vector): address PR review round 11 — broaden offset-skip gate, clarify ordering
- search/context.py: drop the doc_type=='file' guard on skip_offset_lookup
  so notes / deck cards / news items also bypass the unindexed offset
  fallback when chunk_index is available. Legacy chunk_index=None data
  still uses the offset path.
- vector/qdrant_client.py: clarify the backfill/_ensure_payload_indexes
  ordering invariant (backfill rewrites payload values only, never schema
  or indexes). Acknowledge OSS-vs-Cloud uncertainty in the 400-branch
  comment and the new-collection call-site comment.
- vector/scanner.py: hoist qdrant_client to function scope so the
  file-scroll block doesn't depend on a name bound inside the
  notes-scroll block.
- tests/unit/test_chunk_context_offset_gate.py: flip the note-with-
  chunk_index test to assert the offset fallback is skipped.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 17:59:41 +02:00
Chris CoutinhoandClaude Opus 4.7 fec1596784 fix(vector): address PR review round 9 — drop redundant guard, add init lock, test float doc_id path
Addresses the four 🟡 important findings from claude-bot review on PR #773:

str (non-Optional) and the guard would silently skip the Qdrant lookup
for an empty string. Removing the guard matches the type signature.

(`all([…, doc_id, …])` rejects None and empty string, plus
`assert doc_id is not None`). No code change needed.

`get_qdrant_client()` with a module-level `anyio.Lock`. Double-checked
locking keeps the steady-state hot path lock-free. Without this,
parallel cold-start callers could all enter the init block and run
`_backfill_doc_id_to_string` + `_ensure_payload_indexes` redundantly
(idempotent, but noisy). Pattern matches `auth/storage.py:2071`.

behavior with three tests covering the float-warning path (the gap
called out in the review), the str/None silent-skip paths, and the
int-grouping happy path.

Verification:
- ruff check / format: clean
- ty check -- nextcloud_mcp_server: clean
- uv run pytest tests/unit/: 969 passed

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 15:53:33 +02:00
Chris CoutinhoandClaude Opus 4.7 a27f738dbf fix(vector): tighten get_chunk_bbox_and_page_from_qdrant doc_id to str
🔴 Blocking finding from PR #773 latest review:
`get_chunk_bbox_and_page_from_qdrant` (`search/context.py:199`) still
declared `doc_id: int | str` and passed the raw value into
`MatchValue(value=doc_id)` at lines 239 and 256 without `str()`
coercion. After this branch's startup backfill normalises every Qdrant
`doc_id` payload to a string, an `int` filter would silently match zero
points — the function would return `(None, None)` instead of the
chunk bbox / page, and PDF highlight overlays would fail in production.

Take option 2 from the reviewer's two suggestions (annotation
tightening over inline coercion): the producer side of this PR has
already narrowed every other `doc_id` annotation to `str`, so this
function is the last hold-out. Pushing the contract into the type
system means `ty` will catch any future regression at the call site.

Production callers in `api/visualization.py` and `auth/viz_routes.py`
already pass `doc_id` (str) verbatim after the recent merge with
master's chunk_index-first refactor, so no caller-side changes needed.

Update the 9 calls in `tests/unit/test_chunk_bbox_helper.py` to use
string literals (`"42"` / `"99"` / `"1"`) instead of integers. The
mock doesn't validate `MatchValue` value types, so the tests passed
with stale int doc_ids today — but they were exercising a path
production no longer takes.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 14:32:33 +02:00
Chris Coutinho 9720a7e4fe Merge remote-tracking branch 'origin/master' into fix/qdrant-doc-id-keyword-index 2026-05-09 13:48:21 +02:00
Chris CoutinhoandClaude Opus 4.7 7ef8760d27 fix(chunk-context): address PR #767 review — extract bbox helper, fix page_number overwrite
Resolves both 🟡 important issues from the latest review:

1. `page_number` was unconditionally overwritten in `viz_routes.py:696` even
   when Qdrant's payload lacked the field, clobbering the value resolved
   from `chunk_context.page_number`. The new helper returns each field
   independently and both call sites only overwrite via `is not None`
   guards, matching the existing logic in `visualization.py`.

2. The ~60-line `if chunk_index is not None: ... else: ...` Qdrant scroll
   block was duplicated between `api/visualization.py` and
   `auth/viz_routes.py`. Extracted into `get_chunk_bbox_and_page_from_qdrant`
   in `search/context.py` alongside the existing private `_get_chunk_*_from_qdrant`
   helpers; both routes now share ~12 lines of caller code.

New unit tests at `tests/unit/test_chunk_bbox_helper.py` cover the indexed
and offset paths, the `(bbox, None)` regression case, and graceful
degradation on Qdrant strict-mode 400 (which also closes nit #4).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 13:29:22 +02:00
Chris CoutinhoandClaude Opus 4.7 c780f96d2b fix(chunk-context): address PR #767 review — drop dead PDF branch, redundant alias, add boundary tests
- Remove unreachable doc_type=="file" branch (and pymupdf/pymupdf4llm
  imports) from _fetch_document_text in search/context.py — the file
  path is short-circuited in get_chunk_with_context before reaching it.
- Drop the redundant `username = request.user.display_name` alias in
  auth/viz_routes.py; both Qdrant scroll filters now reference user_id
  consistently with the rest of the handler.
- Add TestAdjacentChunkBoundary in tests/unit/test_chunk_context_offset_gate.py
  covering chunk_index=0 (before-fetch gate closed) and
  chunk_index=total_chunks-1 (after-fetch gate closed) — the two
  off-by-one boundaries previously untested.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 00:07:51 +02:00
Chris CoutinhoandClaude Opus 4.7 47b0b737b6 fix(chunk-context): address PR #767 round-3 review — gate readability + legacy-fallback comment
- search/context.py: rename triple-negation gate condition to
  `skip_offset_lookup` named boolean for readability; convert new
  logger.warning to lazy %-style per repo convention.
- api/visualization.py, auth/viz_routes.py: add comment on the offset-only
  Qdrant scroll branch noting it is a legacy path for pre-astrolabe#75
  clients and degrades gracefully on Qdrant Cloud strict mode.

Reviewer item #2 (extracting the duplicated scroll block into a shared
helper) deferred to a follow-up issue per the reviewer's "not blocking"
framing.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 23:21:30 +02:00
Chris Coutinho 058463ee87 Merge remote-tracking branch 'origin/master' into fix/chunk-context-indexed-lookup
# Conflicts:
#	nextcloud_mcp_server/api/visualization.py
#	nextcloud_mcp_server/auth/viz_routes.py
2026-05-08 23:10:09 +02:00
Chris Coutinho 02744a50e0 Merge remote-tracking branch 'origin/master' into fix/qdrant-doc-id-keyword-index 2026-05-08 23:08:39 +02:00
Chris CoutinhoandClaude Opus 4.7 0b004f54bd refactor(vector): address PR #775 review round 3 — fix unused var, harden boundary lookup, rename trace span
- pdf_highlighter.compute_chunk_bboxes_batch: drop unused chunk_text
  destructure (SonarQube finding), and replace positional
  page_boundaries[page_num - 1] with a key-based next() match so
  reordered or non-1-indexed boundaries can't silently shift the bbox.
  Convert touched f-string log to lazy %s formatting.
- vector/processor: rename the trace_operation span from
  "vector_sync.generate_highlights" to "vector_sync.compute_chunk_bboxes"
  to match what the function actually does.
- Add test_compute_chunk_bboxes_handles_unordered_page_boundaries —
  reverses the boundaries list and asserts identical results to the
  in-order case, guarding the boundary-lookup regression class.
- Pin pre-push-review skill to sonnet model.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 23:05:31 +02:00
Chris CoutinhoandClaude Opus 4.7 92b2d50cd7 fix(vector): address PR review round 3 — sentinel guard, skip indexed fields, narrow types
- Add a fixed-UUID sentinel point written after a successful doc_id
  backfill so subsequent restarts retrieve it and short-circuit the
  O(N) scroll. Sentinel has no user_id/doc_id/doc_type payload so
  production search filters never see it.
- Pre-fetch payload_schema in _ensure_keyword_payload_indexes and
  silently skip fields that are already indexed; the "Created KEYWORD
  payload index" INFO log fires only on actual creation.
- Narrow stale `int | str` doc_id annotations to `str` across
  search/verification.py (BatchVerifier return type, per-verifier
  accessible sets, by_type / accessible_by_type / inaccessible
  collections); drop the now-redundant `type(d).__name__` prefix in
  the dropped-docs log.
- Align the backfill log message with the PR description's
  "Running doc_id backfill" promise; add a caller cross-reference to
  the wait=True comment.
- Fix _get_file_path_from_qdrant docstring (file_id is str, not numeric).
- Convert legacy `id=1` to `id="1"` in test_search_result.py to match
  the SearchResult.id: str annotation.

Three new unit tests cover sentinel-found, sentinel-written, and
skip-existing-index branches; existing backfill tests pass dimension
and explicit retrieve.return_value=[] for the no-sentinel path.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 22:59:46 +02:00
Chris CoutinhoandClaude Opus 4.7 45da876cf5 fix(chunk-context): propagate chunk_index=None through ChunkContext
Addresses the deferred half of PR #767 review issue 2: instead of just
documenting the "0/N misreport" with a logger.warning, propagate the
caller's None for chunk_index through the dataclass, position markers,
and response builders so callers can distinguish "unknown position"
from "actually chunk 0".

Changes:
- ChunkContext.chunk_index: int → int | None
- _insert_position_markers: chunk_index parameter is int | None; when
  None, renders "Chunk ?/N" instead of "Chunk 1 of N"
- get_chunk_with_context: drops the effective_chunk_index local entirely.
  Passes chunk_index (may be None) directly into both ChunkContext and
  _insert_position_markers, in both the Qdrant fast path and the
  doc-text fallback.
- Fast path: when chunk_index is None and chunk_text was retrieved via
  the offset lookup (notes/cards), skip the adjacent-chunk fetch.
  Index arithmetic from a default 0 would query the chunks at positions
  -1 and 1 even when the actual chunk is, say, 5/20 — silently producing
  wrong "before"/"after" text. Mark both sides as truncated instead.
- Drop the now-redundant logger.warning in the doc-text fallback (the
  response correctly communicates the unknown state via chunk_index=None).

Both existing response builders (`api/visualization.py:657` and
`auth/viz_routes.py:717`) already serialise `chunk_context.chunk_index`
unconditionally; `None` becomes JSON `null`. No route changes needed.

Adds 5 regression tests:
- ChunkContext.chunk_index propagates as None in fast path
- ChunkContext.chunk_index propagates as None in doc-text fallback
- Fast path with chunk_index renders "Chunk N of M" correctly
- _insert_position_markers renders "?/N" for None chunk_index
- _insert_position_markers renders explicit index when supplied

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 22:16:00 +02:00
Chris CoutinhoandClaude Opus 4.7 b5b4025bb4 fix(vector): address PR review round 2 — status branching, doc_id guard, doc restore
- _ensure_keyword_payload_indexes: distinguish 400 (schema conflict, warning)
  from other status codes (5xx/network, error) so a transient outage doesn't
  silently leave the collection unindexed.
- build_search_result_from_point: use .get("doc_id") + return None on missing
  instead of KeyError-crashing the search; reverse metadata merge order so
  payload-derived chunk_index/total_chunks win over caller-supplied extras.
- docs/configuration.md: restore the OpenAI/Mistral/Bedrock/Simple provider
  sections + reference-table rows that were dropped in the rebase. Reword
  the "Startup migrations" bullet to describe what the code actually does
  (no sampling — full scroll, zero writes when clean). Add operator note
  about the SemanticSearchResult.id TypeError path.
- tests: pytest.approx for float equality (Sonar python:S1244); coverage
  for non-400 → ERROR, payload={doc_id: None}, and missing doc_id key.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:37:10 +02:00
Chris CoutinhoandClaude Opus 4.7 80b27b1bc6 refactor(vector): address PR #775 review — drop unused payload key, fix resource leaks
- Drop chunk_bbox_page from Qdrant payload — viz endpoints never read it
  (page_number is the canonical PDF page field).
- Bump upsert BATCH_SIZE 10 → 100 now that payloads no longer carry PNGs.
- compute_chunk_bboxes_batch: move doc.close() into finally, replace
  unused stored_page_num with _.
- purge_page_images.py: switch to anyio.run() per project convention,
  and wrap AsyncQdrantClient in try/finally so the aiohttp session is
  always closed (the class doesn't implement async-context-manager).
- Decorate new bbox unit tests with @pytest.mark.unit so they run under
  the fast-feedback selector.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:32:12 +02:00
Chris CoutinhoandClaude Opus 4.7 51c1d42ea3 fix(chunk-context): address PR #767 round-2 review — gate, parity, doc
Latest reviewer comment flagged five items on top of the original PR. This
commit addresses every one:

🟡 1. Skip the offset-based Qdrant fallback for `doc_type=file` when
   `chunk_index` is supplied. Qdrant Cloud's strict mode rejects unindexed
   filter fields with HTTP 400, which `_get_chunk_from_qdrant` catches and
   logs at `logger.error` — masking real Qdrant problems in monitoring.
   Notes/cards keep the offset fallback (cheap, useful for legacy data).

🟡 2. Add a `logger.warning` and clarifying inline comment in the doc-text
   fallback path when `chunk_index` is None — surfaces the pre-existing
   "0/N misreport" so callers can detect it. Type-nullability propagation
   is deferred to a follow-up (out of scope for this hotfix).

🟢 3. Simplify `if chunk_text and doc_id_int is not None:` →
   `if chunk_text:` with an inner `assert doc_id_int is not None` for
   `ty` narrowing. The outer second clause was dead.

🟢 4. Add `doc_type` `FieldCondition` to the offset-based image lookup in
   both `visualization.py` and `viz_routes.py` for parity with the
   `chunk_index` branches.

🟢 5. Inline the `chunk_filter` local in `visualization.py` directly into
   the `must=[]` list (matches `viz_routes.py` style).

Adds `tests/unit/test_chunk_context_offset_gate.py` with three regression
tests covering the gate matrix: (file, with-index → skip offset),
(note, with-index → still tries offset), (file, no-index → still tries
offset). Lives at top-level rather than `tests/unit/search/` to side-step
a pre-existing circular-init issue in `nextcloud_mcp_server.search`.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:28:50 +02:00
Chris CoutinhoandClaude Opus 4.7 ee402ea00e feat(vector): replace inline page-image payloads with chunk_bbox (Deck #76)
Per-chunk PDF page renders (~150–700 KB base64 PNG each) were the dominant
disk consumer in production, repeatedly tripping `No space left on device:
WAL buffer size exceeds available disk space` on welcomed-malamute Qdrant.

Replace the inline highlighted_page_image / highlighted_page_number /
highlight_count fields with a small `chunk_bbox` field:
list[(x0, y0, x1, y1)] of normalized [0, 1] floats, ~32 bytes per chunk.
Astrolabe (the only known consumer) renders the highlight client-side as
a percentage-positioned overlay on top of the existing /api/v1/pdf-preview
render-on-demand path (cbcoutinho/astrolabe#76).

- pdf_highlighter: new compute_chunk_bboxes_batch() that reuses the
  existing _find_chunk_bbox text-search path, skipping all pixmap/PIL/PNG
  work.
- processor: store chunk_bbox + chunk_bbox_page in the Qdrant payload,
  drop highlighted_page_image + friends, drop the base64 import.
- visualization /api/v1/chunk-context and auth/viz_routes: read
  chunk_bbox instead of highlighted_page_image.
- vector/__init__: stop eagerly re-exporting `processor`/`scanner` —
  fixes a pre-existing circular import (search.algorithms ->
  vector.placeholder -> vector/__init__ -> processor -> scanner ->
  server.semantic -> search.bm25_hybrid -> search.algorithms partial).
  Test suite that was broken on master (test_bm25_hybrid.py et al.) now
  collects and passes.
- scripts/purge_page_images.py: ad-hoc, idempotent migration that
  delete_payload's the legacy keys from existing points. No reindex
  required; legacy chunks render the page with no overlay.

Pairs with cbcoutinho/astrolabe#76. Frontend handles missing chunk_bbox
gracefully, so this can land in either order.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:16:00 +02:00
Chris CoutinhoandClaude Opus 4.7 6aba589a6e fix(vector): address PR review — wait=True backfill, batched writes, search helper
Addresses reviewer feedback on PR #773:

- Backfill set_payload now uses wait=True to avoid a race where
  _ensure_keyword_payload_indexes builds the KEYWORD index before
  fire-and-forget writes have committed, leaving int payloads
  invisible to filters.
- Batch points sharing the same int doc_id into a single set_payload
  call (one document → many chunks → one round-trip instead of N).
- Drop _has_int_doc_id_sample short-circuit. The sample's false-negative
  window (clean first 256 results, ints further in) is gone; full scroll
  is the dominant cost on first run anyway.
- Simplify _ensure_keyword_payload_indexes: the "already exists" 400
  branch was dead code (Qdrant returns 200 on identical re-create); any
  400 now logs a warning and continues.
- search/context.py: comment the broadened file-type guard. Add explicit
  not doc_id.isdigit() checks at the top of note/news_item/deck_card
  branches in _fetch_document_text so malformed payloads surface as
  warnings instead of being swallowed by the broad except.

Also extracts build_search_result_from_point into search/algorithms.py
to deduplicate the 71-line payload-extraction loop shared by
SemanticSearchAlgorithm and BM25HybridSearchAlgorithm. This fixes
SonarQube's quality-gate failure (4.0% new-code duplication, max 3%).

Test coverage:
- 7 new unit tests for build_search_result_from_point covering missing
  payload, note/file/deck_card metadata, int doc_id coercion, and
  metadata_extras merging.
- Replace _has_int_doc_id_sample tests with clean-collection no-op and
  per-batch grouping tests.
- Update set_payload assertions from wait=False to wait=True.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:14:28 +02:00
Chris CoutinhoandClaude Opus 4.7 8457c427a5 fix(chunk-context): address PR #767 review — doc_type filter parity + tests
- Add `doc_type` FieldCondition to the chunk_index-path highlighted-image
  Qdrant filter in both `api/visualization.py` and `auth/viz_routes.py`,
  matching the shape of `_get_chunk_by_index_from_qdrant`. Safe today (the
  block is guarded by `doc_type == "file"` and Nextcloud file IDs are
  globally unique) but prevents a latent bug if other doc types start
  storing highlighted images.
- Demote `viz_routes.py` `ValueError` log from `error` to `warning` (lazy
  %-style) — `_parse_int_param` raises on user-supplied bad input, which
  is a 400 not a server error and shouldn't pollute error logs.
- Hoist `effective_chunk_index` to compute once at the top of
  `get_chunk_with_context`, removing two duplicate assignments.
- Add `test_file_doc_type_qdrant_miss_yields_fast_404` to the management
  endpoint tests, locking in the proxy-timeout fix contract.
- Add `tests/unit/test_viz_routes_chunk_context.py` mirroring management
  coverage for the OAuth-session route: param forwarding (chunk_index /
  total_chunks), `doc_type=file` fast 404, and 400 on invalid int params.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 20:50:27 +02:00
Chris CoutinhoandClaude Opus 4.7 719b3b5034 fix(vector): normalize doc_id to str + add Qdrant keyword payload indexes
Production was logging two cascading classes of Qdrant errors against the
welcomed-malamute deployment:

1. HTTP 400 — "Bad request: Index required but not found for \"doc_id\" of
   one of the following types: [keyword]". The collection was created via
   create_collection() with no payload indexes, so any FieldCondition
   filter on doc_id failed at the Qdrant layer (placeholder writes/reads,
   eviction, search context lookups).

2. Compounding the missing index, producers wrote a mix of int and str
   doc_ids: webhook_parser stringified node_id, scanner stringified note
   IDs, news IDs, and deck card IDs — but the file scanner passed the
   numeric file_id through unchanged. A keyword index would not have
   covered both kinds even if it had existed.

This change:

- Normalizes doc_id to str at every producer site (scanner.py:459,
  DocumentTask.doc_id, indexed_*_ids reads from Qdrant).
- Tightens str|int annotations to str across placeholder.py,
  eviction.py, search/verification.py, search/context.py,
  SearchResult.id, and the auth/api visualization endpoints.
- Defensive str() coercion on doc_id reads in semantic.py /
  bm25_hybrid.py / vector/visualization.py for the transition window
  before the backfill runs.
- Adds an idempotent startup migration in get_qdrant_client():
  - _ensure_keyword_payload_indexes creates KEYWORD indexes for
    doc_id, user_id, and doc_type (tolerates "already exists" 400s).
  - _backfill_doc_id_to_string scrolls the collection once and rewrites
    int doc_ids to str. Skipped after a quick sample shows no legacy
    int payloads.
- Public API preserved: SemanticSearchResult.id stays int via explicit
  int(r.id) narrowing in server/semantic.py — surfaces a TypeError with
  actionable context if a future doc_type ships non-numeric ids.
- Documents the startup migration in docs/configuration.md.

Tests: 11 new unit tests in tests/unit/vector/test_qdrant_client.py
covering happy path / already-exists / unrelated-400 for the index
helpers, and sample-skip / mixed-batch rewrite / payload=None edge cases
for the backfill. 889 unit tests pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 19:30:51 +02:00
Chris CoutinhoandClaude Opus 4.7 90458b6f08 fix(chunk-context): use indexed chunk_index lookup, fix close-after-use bug
Two related bugs surfaced in production while viewing chunks from the
Astrolabe frontend on the AWS-hosted MCP server:

1. PyMuPDF document closed: in _fetch_document_text the fallback path
   referenced pdf_doc.page_count after pdf_doc.close(), raising
   "document closed" and returning None. The slow PDF re-parse already
   completed but its result was discarded. Capture page_count into a
   local before close().

2. Slow/fragile chunk lookup: get_chunk_with_context filtered Qdrant by
   (chunk_start_offset, chunk_end_offset). Those fields are not part of
   the always-indexed payload schema, and with strict_mode enabled they
   yield 400 errors. Even with manually-added indexes the filter is
   fragile if a doc is re-chunked. Switch to chunk_index (always
   indexed) as the primary lookup key, falling back to offset-based
   lookup when callers don't supply it.

Plumb chunk_index/total_chunks through both the management API
(api/visualization.py) and the OAuth viz route (auth/viz_routes.py).
Apply the same change to the highlighted-image lookup so all four
chunk-context Qdrant queries prefer the indexed field.

Skip the slow PDF re-parse fallback entirely for files: when both the
chunk_index and offset Qdrant lookups miss, re-downloading and
re-parsing the source PDF won't find the chunk either, and routinely
exceeds 30s on large documents - which is the proxy timeout in
Astrolabe. Notes/cards keep the document-fetch fallback (cheap).

Removes dead code (_get_file_path_from_qdrant) that was only used by
the now-unreachable file fallback path.

Companion change in the Astrolabe app passes chunk_index from search
results through to the new endpoint params.

---

_This PR was generated with the help of AI, and reviewed by a Human_

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 10:58:48 +02:00
Chris CoutinhoandClaude Opus 4.7 104bbd390d refactor(search): address PR #750 round 12 review feedback
Six review items raised; four required code changes (#3, #4, #5, #6) and
two were resolved without code changes (#1 audit-only, #2 informational).

* search/verification.py — clarify the granularity asymmetry between the
  whole-batch fail-open (structural API failure) and the per-item fail-open
  (single bad stored doc_id). Future readers no longer need to derive why
  the two paths have different blast radii from the code alone.

* models/semantic.py — `dropped_document_count` description now explicitly
  notes that subtracting it from `verified_chunk_count` is not a meaningful
  operation, since the two fields count different units (documents vs
  chunks). Surfaces the unit mismatch where MCP clients actually see it.

* server/semantic.py — clarify the per-doc_type over-fetch comment so the
  N×2 pre-merge Qdrant cost (vs the cross-app branch's 1×2) is explicit
  rather than implied by "same 2× over-fetch budget".

* tests/unit/search/test_verification.py — add four new 429 unit tests
  (notes/news/files/deck) mirroring the existing 5xx-keeps pattern. Locks
  in that `_is_definitive_404_or_403` returns False for 429 so a future
  refactor cannot accidentally treat rate-limit responses as permanent
  revocations.

Audit confirmation for review item #1: all four `WebDAVClient.get_file_info`
call sites already handle the new `HTTPStatusError`-on-404 contract
(verification.py:156, tests/integration/test_rag.py:139,
tests/unit/client/test_webdav.py:153/190). No silent breakage internal to
this repo.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-02 00:26:06 +02:00
Chris CoutinhoandClaude Opus 4.7 1ed8362f78 refactor(search): address PR #750 round 11 review feedback
Three minor fixes from the round-11 review on PR #750:

- bm25_hybrid.py:209 — Comment said `doc_id` is `int (notes) or str (files)`,
  which is backwards. Notes, news_items, and deck_cards are stored as `str`
  (scanner.py:241, 666, 867); files are stored as `int` (scanner.py:425).
  Updated to point readers at scanner.py as the source of truth.

- verification.py:338 — Lowered the News-API 403/404 log line from `info`
  to `debug`. The News app being uninstalled or disabled is a predictable
  operational state (matching the other verifiers' debug-on-not-found
  paths), so this should not generate operator-dashboard noise. Transient
  errors immediately below stay at `warning` because they're unexpected.

- semantic.py:809 — `nc_get_vector_sync_status` was reading
  `document_receive_stream` via `getattr(..., None)`, but the attribute is
  guaranteed-defined on both `AppContext` and `OAuthAppContext` (as a
  field with `None` default). The defensive `getattr` masked typos that
  the eviction_task_group access at semantic.py:197-199 deliberately
  surfaces. Switched to direct access; the `if … is None:` value-check
  below is preserved (the attribute can legitimately be None before sync
  starts).

Items deliberately deferred (with rationale in the plan file):
- News verifier semaphore-hold during get_items (reviewer: "not required
  here, just worth tracking"; ADR already lists follow-ups).
- Hardcoded 2× over-fetch / VERIFICATION_OVERFETCH (TODO already in code).
- Integration test for the real Qdrant eviction filter (reviewer marked
  low-priority; type-preservation chain is unit-tested).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 23:00:42 +02:00
Chris CoutinhoandClaude Opus 4.7 15ffeca312 refactor(search): address PR #750 round 10 review feedback
- Tighten verify_search_results signature: client: Any → NextcloudClientProtocol
- Collapse 3 copy-pasted lock-justification comments to a single-line pointer
- Add logger.debug timing around the verify_search_results call site
- Add logger.debug timing around the unbounded news.get_items fetch
- Rename SemanticSearchResponse.dropped_count → dropped_document_count to make
  the chunks-vs-documents unit asymmetry explicit at the API boundary
- Drop unreachable duplicate 409 branch in WebDAVClient.move_resource

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 22:44:57 +02:00
Chris CoutinhoandClaude Opus 4.7 852ffa3678 refactor(search): address PR #750 round 9 review feedback
- Add concurrency-safety comments to per-verifier accessible sets in
  _verify_notes/_verify_files/_verify_deck_cards. Same rationale as
  accessible_by_type in verify_search_results: anyio is cooperative,
  set.add() is not an await point.
- Document 401 exclusion in _is_definitive_404_or_403 (treated as
  transient because it usually signals expired credentials, not
  permanent denial).
- Note multi-user compounding in the news verifier semaphore comment:
  N concurrent users hold N slots out of the shared budget.
- Log inaccessible doc ids with a type tag (e.g. "int:42" vs "str:42")
  so ghost-record logs disambiguate id types.
- Type the BatchVerifier alias and the four verifier function signatures
  with NextcloudClientProtocol instead of Any (algorithms.py exposes
  the right interface; the protocol is runtime_checkable).
- Surface verified_chunk_count vs dropped_count semantics in the
  nc_semantic_search tool docstring Returns block (chunks vs unique
  documents).
- Add comments to the two max_concurrent=20 sites in server/semantic.py
  noting they are intentionally distinct from
  settings.verification_concurrency (different request phases).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 22:18:03 +02:00
Chris CoutinhoandClaude Opus 4.7 3153c9dac4 refactor(search): pre-push review fixes for PR #750
Address findings surfaced by `pre-push-review` after the round 8 sweep:

- Add deck verifier symmetry tests (404, transient 5xx, unexpected
  exception, non-numeric metadata) so deck has the same shape as the
  notes/news/files verifiers. Also add unexpected-exception tests for
  the news and file verifiers, which had `except Exception` branches
  no test was reaching. Keeps the registry-style verifier coverage
  uniform.
- Modernize sibling field types in `VectorSyncState`, `AppContext`,
  and `OAuthAppContext` from `Optional[X]` to `X | None`, matching the
  `eviction_task_group: TaskGroup | None` field added in the round 8
  diff (resolves the inconsistency flagged by A6). The lone remaining
  `Optional` import is dropped.
- Reverse cross-reference direction in the verifier docstrings: the
  later-defined `_verify_deck_cards` and `_verify_news_items` now
  point at `_verify_notes` as the canonical hoisted-cast pattern,
  rather than `_verify_notes` forward-referring to verifiers defined
  below it.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:57:38 +02:00
Chris CoutinhoandClaude Opus 4.7 8a2626da6c refactor(search): address PR #750 round 8 review feedback
- Rename `verified_count` → `verified_chunk_count` to make the count
  granularity explicit at the field name (chunks vs unique docs).
- News verifier now fails open *per-item* on non-numeric stored doc_ids
  (matches notes/files/deck shape); a single bad id no longer rescues
  definitively-missing siblings from eviction.
- Update note-verifier integration test to use string doc_ids end-to-end
  to match production storage (scanner.py:241 stringifies note ids).
- Add regression test for the closed-task-group race guard in
  `verify_search_results` so the RuntimeError swallow is locked in.
- Convert remaining f-string logger calls in `server/semantic.py` to
  lazy %-style formatting (per repo convention).
- Document `evict_on_missing` as a developer/test flag (no env var) and
  flag the `get_file_info` 404→raise contract change in its docstring.
- Add a TODO(ADR-019) breadcrumb for the hardcoded 2× over-fetch so
  future tuning has a clear hook.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:40:30 +02:00
Chris CoutinhoandClaude Opus 4.7 3e981e647a refactor(search): address PR #750 round 7 review feedback
Round 7 raised 5 issues; this round addresses all of them and fixes
the underlying causes (not just the comments) where applicable so
they don't get re-flagged in future passes.

Critical:
- verified_count description in SemanticSearchResponse said "unique
  documents" but the value is len(verified_results), a chunk count.
  Description rewritten to accurately document chunk-level granularity
  AND explicitly call out the asymmetry with dropped_count (which
  counts unique (doc_id, doc_type) pairs).

- _verify_files false-eviction risk: the round-6 doc-only fix was
  re-flagged. Address at the source — widen WebDAVClient.get_file_info
  to raise HTTPStatusError on 404 (matching the rest of the client
  convention) and reserve None for the genuinely ambiguous
  malformed-PROPFIND case. _verify_files now keeps the result on None
  (cannot tell whether the file exists) and evicts only on a
  definitive HTTPStatusError 404. Tests updated; new test added for
  the malformed-XML keep-result path.

Non-critical:
- News verifier semaphore lifetime now explicitly documented: one
  slot held for one deduplicated fetch per search is the correct
  backpressure behaviour.

- Cross-reference comments in _verify_notes / _verify_deck_cards no
  longer claim "Mirrors X" pointing at functions defined later in
  the file; now use direction-neutral "parallel implementation in".

- accessible_by_type is mutated by concurrent run_verifier tasks; a
  comment explains why this is race-free under anyio's cooperative
  multitasking (distinct keys per task, no await between read and
  write) so a future reader doesn't add a redundant lock.

- Knock-on: tests/integration/test_rag.py wraps get_file_info in a
  try/except for the new contract.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:15:39 +02:00
Chris CoutinhoandClaude Opus 4.7 e8df6003c5 refactor(search): address PR #750 round 6 review feedback
Closes out the remaining nits flagged in the round-6 review.

Critical:
- _verify_files contract comment now enumerates all None-return cases
  (404 + malformed PROPFIND XML) and documents the false-eviction
  trade-off; self-healing via re-indexing recovers
- int(r.id) cast at the SemanticSearchResult boundary now raises a
  TypeError with explicit doc_type/value context instead of bubbling
  up as an opaque "Search failed: ..." McpError

Design observations:
- nc_semantic_search_answer docstring documents the per-note
  round-trip cost from the post-verification race guard
- News verification latency hint added to configuration.md
- SemanticSearchResponse exposes verified_count + dropped_count so
  short result pages on high-ghost-density indexes are
  distinguishable from genuine scarcity. verify_search_results now
  returns (kept, dropped_count); production caller and tests updated

Minor:
- Comment clarifies the .get() fallback in verify_search_results is
  defensive only (run_verifier always populates the entry)
- Eviction task-group guard narrowed from except Exception to
  except RuntimeError (the only documented failure mode of
  TaskGroup.start_soon on a closed group)
- Indexer logs a warning when a deck_card task is missing
  board_id/stack_id, surfacing data-quality issues at index time
  rather than at verification time
- New unit test covers the news verifier's non-numeric-id fail-open
  path (one bad doc_id keeps the entire batch)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:02:27 +02:00
Chris CoutinhoandClaude Opus 4.7 ffcca23a7b refactor(search): address PR #750 round 5 review feedback
Tightens verifier consistency, closes test gaps, hardens the fire-and-forget
eviction snapshot, and routes the new concurrency knob through Settings.

- Pre-flight ``int()`` guard in ``_verify_notes`` mirrors ``_verify_deck_cards``,
  so a non-numeric note id produces a type-specific log line instead of
  falling through to the generic "unexpected error" branch.
- Adds explicit 403 tests for the file and news verifiers (symmetry with the
  existing notes/deck 403 tests) plus a ``non_numeric_id_keeps`` test.
- ``AppContext`` and ``OAuthAppContext`` no longer snapshot
  ``_vector_sync_state.eviction_task_group`` at lifespan-yield time. Both
  expose it as a ``@property`` that reads the singleton dynamically, removing
  the order-sensitive race where a future startup-ordering change could
  silently degrade fire-and-forget eviction to inline forever.
- Adds ``verification_concurrency`` (env var ``VERIFICATION_CONCURRENCY``,
  default 20) to ``Settings`` with a dynaconf validator; ``verify_search_results``
  resolves the cap lazily from settings when the caller doesn't override it.
- Enriches the news verifier TODO to call out that ``batch_size=-1`` is
  intentional — a numeric ceiling would silently break correctness because
  any item beyond the cap would be missing from ``present_ids`` and dropped.
- Updates ``Optional[TaskGroup]`` to ``TaskGroup | None`` per project style.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 20:45:56 +02:00
Chris CoutinhoandClaude Opus 4.7 926722b09d refactor(search): address PR #750 round 4 review feedback
- Guard eviction_task_group.start_soon against shutdown race so a
  RuntimeError on a closed group never surfaces as a search error.
- Correct ADR-019 news_item row: there is no per-item REST endpoint;
  verification batches via get_items(batch_size=-1) and intersects.
- Modernize models/semantic.py typing to PEP 604 / lowercase generics
  per CLAUDE.md.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 19:28:55 +02:00
Chris CoutinhoandClaude Opus 4.7 aa4b9498a1 refactor(search): address PR #750 round 3 review feedback
- _verify_deck_cards: hoist int(board_id|stack_id|doc_id) out of the generic
  except Exception into an explicit try/except (TypeError, ValueError) before
  the network call, mirroring _verify_news_items. Malformed payloads now log
  a specific warning instead of "unexpected error".
- _verify_news_items: add TODO(perf) above the get_items(batch_size=-1) call
  to mark the known fetch-all cost as a future profiling target.
- SemanticSearchResult.id: revert from int|str back to int. The internal
  SearchResult.id stays int|str for forward-compat; the MCP response model
  narrows at the boundary. server/semantic.py casts r.id to int when
  constructing the response so future string-id types fail loudly here
  instead of silently widening the public API.
- nc_semantic_search: replace the terse "extra for access filtering" comment
  with an ADR-019 NOTE block explaining the 2x over-fetch trade-off and the
  ghost-density under-delivery case (self-heals via lazy eviction).
- tests/integration/test_verify_on_read.py: extend the module docstring to
  call out that only the note verifier is exercised against real Nextcloud,
  while file/deck_card/news_item are unit-only — documenting the suite split
  for future contributors.
- ADR-019: rewrite "Module shape", "Verifier registry", example verifier,
  and "Deduplication" sections to match the shipped BatchVerifier interface
  (was per-id Verifier in the original draft). Add a "Why batch?" paragraph
  explaining the design choice. Update implementation checklist — every
  item is now [x] with corrected verifier names (plural) and the eviction
  module path (vector/eviction.py).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 19:17:35 +02:00
Chris CoutinhoandClaude Opus 4.7 21e5608a39 refactor(search): address PR #750 round 2 review feedback
Implements fire-and-forget eviction (ADR-019 §"Lazy eviction"): the
search response no longer waits on Qdrant deletes, instead spawning
evict() on a long-lived lifespan-owned task group. Falls back to inline
eviction in modes without vector sync and in unit tests.

Also: harden _verify_news_items against non-numeric ids (fail open
instead of crashing the verifier); document the get_file_info None-on-404
contract; add INDEXED_DOC_TYPES single source of truth in vector/scanner.py
referenced by the CI-guard test; write a Verify-on-Read Latency Budget
section in docs/configuration.md covering the unbounded news.get_items
fetch. Closes the two remaining ADR-019 implementation checklist items.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 18:53:32 +02:00
Chris CoutinhoandClaude Opus 4.7 7784ec02d7 refactor(search): address PR #750 review feedback
- Cap all_results to limit*2 after sort in the per-doc_types branch of
  nc_semantic_search to bound over-verification (was unbounded N-types).
- Switch BatchVerifier from (client, doc_ids, user_id) to (client, results,
  semaphore). Verifiers now read file paths and deck board/stack ids from
  SearchResult.metadata instead of doing fresh Qdrant scrolls — eliminates
  one duplicate round-trip per file/deck-card verification.
- Bound per-id verification concurrency with a shared anyio.Semaphore
  (default 20, matching server/semantic.py context-expansion convention).
  Prevents httpx pool exhaustion / rate limiting on large search pages.
- Propagate stack_id from Qdrant payload to SearchResult.metadata in both
  bm25_hybrid.py and semantic.py (board_id was already propagated).
- Drop now-unused _resolve_file_path / _resolve_deck_metadata helpers.
- Drop redundant int(d) in requested predicate from _verify_news_items.
- Rewrite eviction comment to be honest about inline (not background)
  execution and the resulting latency coupling.
- ADR-019 status: Proposed -> Accepted.
- Add news property to NextcloudClientProtocol.
- Widen SearchResult.id and SemanticSearchResult.id to int | str to match
  BatchVerifier signature and document support for future string-id types.
- Flip openWorldHint to True on nc_semantic_search_answer (it calls into
  Nextcloud via nc_semantic_search).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 08:22:28 +02:00
Chris CoutinhoandClaude Opus 4.7 d90e793d19 feat(search): verify-on-read for semantic search results (ADR-019)
The vector index lags Nextcloud (5-min webhook cron + scanner interval),
producing ghost records for deleted/unshared documents until the next
reconciliation. Verify each unique document against Nextcloud at query
time, drop inaccessible results, and lazily evict the corresponding
Qdrant points.

Per-doc_type batch verifiers: notes/files/deck cards run concurrently
per id; news items use a single fetch + intersect to avoid the per-item
fetch-all amplification. Transient errors fail open (keep result, log
warning) — only definitive 4xx drops. Multiple chunks of the same doc
collapse to one verification call.

Wired into nc_semantic_search before the limit trim and before context
expansion. nc_semantic_search_answer's per-note re-fetch retained as a
sub-second race guard since verification now happens upstream.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 07:45:01 +02:00
Chris CoutinhoandClaude Opus 4.6 a11ae9c027 refactor: enforce PLC0415 (import-outside-top-level) for source code
Enable ruff PLC0415 rule for all source files (tests excluded via
per-file-ignores). Move 136 inline imports to top-level across 33 files.
8 imports suppressed with noqa for legitimate reasons: circular
dependencies (client/__init__.py, context.py), optional dependency
guards (app.py document processors, auth/userinfo_routes.py), and
post-env-setup imports (smithery_main.py).

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-20 08:04:50 +01:00
Chris Coutinho 056414752e fix(mcp): Move all imports to the top of modules 2025-12-26 10:05:27 -06:00
Chris CoutinhoandClaude Sonnet 4.5 e4f3beee01 fix: resolve type checking warnings for CI
- Add type casts for Starlette app state access
- Add assertions for cipher, card, board, stack after initialization
- Add None checks for XML element text attributes
- Handle __package__ being None in tracing setup
- Fix TokenBrokerService initialization to use storage credentials

Resolves 42 type warnings from ty-check, enabling CI linting to pass.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-18 00:44:58 +01:00
Chris CoutinhoandClaude Sonnet 4.5 85db90a2df feat(search): add file_path metadata and chunk offsets to search results
Changes:
- Add file_path to metadata in semantic and BM25 hybrid search algorithms
  for PDF viewer integration (search/semantic.py:161-163, search/bm25_hybrid.py:230-232)
- Include chunk_start_offset, chunk_end_offset, page_number, and page_count
  in search results for rich chunk display (api/management.py:981-1004)
- Add point_id field to SearchResult for batch retrieval (models/semantic.py)
- Fix type narrowing for chunk context API parameters (api/management.py:1102-1111)
- Fix None-safety in doc_types discovery (search/algorithms.py:114)

This enables the Astroglobe UI to display PDF pages at the correct
location for matched chunks.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-18 00:01:29 +01:00
Chris CoutinhoandClaude Sonnet 4.5 e0320e761c perf(deck): optimize card lookup by storing board_id/stack_id in metadata
Addresses reviewer feedback on PR #395 about O(n²) performance issue.

Changes:
- scanner.py: Add metadata field to DocumentTask with board_id/stack_id
- scanner.py: Populate metadata during deck card scanning (both initial and incremental sync)
- processor.py: Use metadata for O(1) card lookup via get_card() API when available
- processor.py: Fallback to iteration for legacy data without metadata
- context.py: Add _get_deck_metadata_from_qdrant() helper to retrieve metadata from Qdrant
- context.py: Use metadata for fast path lookup in chunk context expansion
- context.py: Add user_id parameter to _fetch_document_text() for metadata retrieval

Performance Impact:
- Before: O(boards × stacks × cards) iteration for each card lookup
- After: O(1) direct API call using stored board_id/stack_id
- Graceful degradation: Falls back to iteration for legacy data

Testing:
- All existing integration tests pass (test_deck_vector_search.py)
- Type checking passes with no new errors

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-14 00:23:12 +01:00
Chris CoutinhoandClaude Sonnet 4.5 20404cf3f2 feat(vector): add Deck card vector search with visualization support
Adds comprehensive vector search support for Nextcloud Deck cards,
including semantic search indexing, chunk preview in the vector viz UI,
and proper deep linking to cards.

**Vector Search Indexing**
- Add deck_card scanning in scanner.py (scan_deck_cards function)
- Index cards from non-archived, non-deleted boards
- Store metadata: board_id, board_title, stack_id, stack_title, card_type, duedate, owner
- Content structure: title + "\n\n" + description (matches indexing format)
- Incremental sync based on lastModified timestamp
- Deletion tracking with grace period

**Vector Visualization Support**
- Add deck_card handler in context.py for chunk preview expansion
- Include board_id in search result metadata (bm25_hybrid.py, semantic.py)
- Expose metadata in viz_routes.py JSON responses
- Update vector-viz.js to construct proper Deck URLs: /apps/deck/board/{board_id}/card/{card_id}
- Update vector_viz.html filter label from "Deck" to "Deck Cards"

**Bug Fixes**
- Skip soft-deleted boards (deletedAt > 0) to prevent 403 Forbidden errors
- Applies to scanner, processor, and context expansion code paths
- Deck API returns deleted boards but rejects stack access with 403

**Testing**
- Add integration tests in test_deck_vector_search.py:
  - test_deck_card_semantic_search: Filtered search with doc_type="deck_card"
  - test_deck_card_appears_in_cross_app_search: Cross-app search includes deck cards
  - test_deck_card_chunk_context: Chunk context fetching for viz preview

**Documentation**
- Update README.md: Add Deck cards to semantic search feature list
- Update semantic-search-architecture.md: Document deck_card support
- Update nc_semantic_search tool documentation

**Type Safety**
- Fix type narrowing for page_boundaries (could be None) using cast()
- Fix scanner.py payload None check for type safety

Resolves vector search for Deck cards across indexing, search, and visualization.

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-13 23:51:18 +01:00
Chris CoutinhoandClaude Opus 4.5 9d0a993c2a feat(vector-viz): add news_item support for links and chunk expansion
Add support for news_item document type in the vector visualization page:

- Add "News" checkbox to document type filter options
- Add URL handler to link news items to /apps/news/item/{id}
- Add content fetching for news items in chunk context expansion

This enables users to search and view news articles in the vector
visualization, with clickable links back to Nextcloud News and the
ability to expand chunks to see full article context.

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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-13 21:34:47 +01:00
Chris CoutinhoandClaude Sonnet 4.5 3f06e2ee77 fix: resolve all type checking errors (8 errors fixed)
Fixed 8 type checker errors across the codebase:

- vector/scanner.py: Handle None scroll results with null-safe iteration
- search/{bm25_hybrid,semantic}.py: Add None checks for result.payload
- auth/{unified_verifier,webhook_routes}.py: Assert non-None auth credentials
- client/webdav.py: Add None checks before int() conversions
- providers/openai.py: Assert embedding_model is not None
- search/algorithms.py: Explicitly type doc_types set and cast values
- observability/logging_config.py: Match parent class signature (log_data)

Also fixed test_create_tag_creates_system_tag to match WebDAV implementation
(was testing OCS API endpoint, now tests correct WebDAV endpoint with
Content-Location header).

Type checker: 0 errors (down from 8), 20 warnings (ignored)
Tests: All 192 unit tests passing

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-08 01:09:02 +01:00
Chris CoutinhoandClaude fafeaf3d83 refactor: Move background tasks to server lifespan and deprecate SSE transport
- Move scanner/processor tasks from FastMCP session lifespan to Starlette
  server lifespan (correct architecture: background tasks run once at
  server level, not per-session)
- Change default CLI transport from SSE to streamable-http
- Remove SSE transport option from CLI (SSE is deprecated)
- Remove SSE client session factory from test fixtures
- Add tracing instrumentation to BM25 hybrid search operations for
  better observability

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Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-23 04:02:30 +01:00
Chris CoutinhoandClaude b0612cfa0f perf: Optimize vector viz search performance
- Replace sequential Qdrant scroll calls with batch retrieve
  (50 HTTP requests → 1 request, ~50x faster vector fetch)

- Add point_id to SearchResult to enable batch retrieval by Qdrant point ID

- Reuse query embedding from search algorithm in viz_routes
  (eliminates redundant embedding call, saves ~30ms)

- Make BM25 encode() async with thread pool to avoid blocking event loop
  (~4.4s was blocking, now properly async)

- Run PCA computation in thread pool to avoid blocking event loop
  (~1.2s was blocking, now properly async)

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Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-22 19:47:43 +01:00
Chris CoutinhoandClaude 34fd17ba55 fix: Use alpha_composite for proper RGBA highlight blending
Drawing directly with ImageDraw on RGBA mode doesn't blend alpha
properly. Use Image.alpha_composite() with a transparent overlay
to achieve correct semi-transparent highlight fills.

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Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-22 17:04:29 +01:00
Chris CoutinhoandClaude 31fade9730 perf: Optimize PDF processing with parallel extraction and single-render highlights
Phase 1 - PDF Highlighting Optimization:
- Render each page ONCE instead of once per chunk (N chunks = 1 render, not N)
- Use PIL to draw bounding boxes on copied base images (fast) instead of
  re-rendering page via pymupdf (slow)
- Add _find_chunk_bbox() to extract bbox without modifying page

Phase 2 - Parallel Page Extraction:
- Use anyio task group with run_sync() for parallel page extraction
- Each page extracted in separate thread via anyio.to_thread.run_sync()
- Event loop stays responsive during extraction
- Remove obsolete _process_sync() method

Expected improvement: 30-50% reduction in total PDF processing time.

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Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-22 03:11:56 +01:00