Commit Graph
92 Commits
Author SHA1 Message Date
Chris CoutinhoandGitHub 9adbf9e8a5 Merge pull request #834 from cbcoutinho/fix/verify-on-read-tag-gate
fix(search): gate verify-on-read file results on vector-index tag membership
2026-06-03 02:00:34 +02:00
Chris CoutinhoandClaude Opus 4.8 ab128bef5b feat(search): ADR-027 Phase 2 — file-path filter
Add a path_prefix filter to semantic search, honoured on both the MCP tool and
the dense-only visualization/API paths through the shared filter contract.

- build_base_filter_conditions: append FieldCondition(file_path,
  MatchText(path_prefix)) when set. file_path is only on doc_type == "file"
  points, so a non-empty path_prefix implicitly restricts to files.
- Promote path_prefix to an explicit keyword param on the SearchAlgorithm ABC
  and both algorithms; thread it through nc_semantic_search (blank ⇒ no filter),
  the /api/v1 search endpoints, and the viz route.
- Add a file_path TEXT payload index to _PAYLOAD_INDEX_FIELDS (no content
  re-index; idempotent startup migration). MatchText tokenizes on server Qdrant
  and matches by substring on local/embedded qdrant-client — both serve folder
  scoping.
- Update ADR-027 (Phase 2 implemented; readiness table; semantics note). Tests.

Refs ADR-027 Phase 2. Deck #177.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-03 00:51:12 +02:00
Chris CoutinhoandClaude Opus 4.8 c2c8dc1a08 feat(search): ADR-027 Phase 1 — modified-date range filter
Add a modified_after/modified_before date-range filter to semantic search,
honoured on both the MCP tool path (BM25HybridSearchAlgorithm) and the
dense-only visualization/API path (SemanticSearchAlgorithm) through one shared
contract.

- Promote modified_after/modified_before to explicit keyword params on the
  SearchAlgorithm ABC and both concrete algorithms; factor the shared
  placeholder+ownership+doc_type+date filter into
  access_filter.build_base_filter_conditions so new filters land in one place.
- nc_semantic_search: accept RFC 3339 / ISO 8601 (or Unix seconds) bounds via
  utils.validation.parse_modified_timestamp; Annotated/Field constraints on the
  numeric args; explicit McpError guard for after > before. Thread the parsed
  bounds through the cross-app and per-doc_type dispatch.
- /api/v1 search endpoints + viz route parse the same formats and 400 on bad or
  inverted ranges.
- Add a modified_at INTEGER payload index to _PAYLOAD_INDEX_FIELDS; the
  idempotent _ensure_payload_indexes() startup path migrates existing
  collections with no content re-index.
- Update ADR-027 to resolve the review feedback (validation placement, shared
  algorithm contract, deferral of nc_semantic_search_answer, payload index,
  RFC-3339-at-the-boundary rationale). Add unit tests.

Refs ADR-027. Deck #177.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-03 00:35:20 +02:00
Chris CoutinhoandClaude Opus 4.8 b736bf199b perf(search): skip exclusion lookup on empty tag set; fix semaphore comment
Address the two important findings from the claude bot's latest re-review:

- _verify_files: skip get_excluded_file_paths entirely when the tag REPORT
  returns no files. An empty `tagged` yields an empty `tagged_ids` regardless
  of exclusions, so the lookup's 2xlen(EXCLUDED_TAGS) WebDAV fan-out is wasted
  work in the common "this tag matched nothing" case. The per-result loop still
  runs, so malformed doc_ids are still kept (fail-open) — pinned by a new test
  (test_verify_files_empty_tag_set_skips_exclusion_lookup), which also asserts
  the exclusion lookup is never awaited.
- Rewrite the semaphore comment: it claimed "the slot bounds them", but the slot
  only caps concurrent *searches* — get_excluded_file_paths internally spawns a
  task group issuing 2xlen(EXCLUDED_TAGS) concurrent WebDAV calls, so live
  Nextcloud connections can exceed VERIFICATION_CONCURRENCY. Comment now says so
  and points at configuration.md.

The third 🟡 (sequential dir expansion in find_files_by_tag) is pre-existing and
flagged by the reviewer as a follow-up, not part of this PR.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-03 00:23:55 +02:00
Chris CoutinhoandClaude Opus 4.8 8cae7d1708 fix(search): address PR #834 review findings
Resolve the latest PR-review comment on the verify-on-read tag-gate work:

- tests: stringify note IDs in test_verify_on_read.py so SearchResult.id
  matches production (scanner stringifies all IDs on write) — helper and the
  keeps/deleted/mixed/dedupe assertions (blocking).
- tests: make the unshared-file negative control a PDF so the drop is
  unambiguously "unshared", not a mime_type_filter mismatch.
- config: add Validator("VECTOR_SYNC_PDF_TAG", len_min=1) — an empty tag name
  would make find_files_by_tag("") misbehave in the verifier and scanner.
- verification: correct the _verify_files comment — two batch fetches (tag
  REPORT + EXCLUDED_TAGS lookup) are held under one semaphore slot; the
  pure-Python intersection runs outside it.
- tests: de-duplicate the minimal-PDF constant into a shared PDF_BYTES in
  tests/integration/conftest.py, imported by both integration modules.

Verified: ruff/format/ty/unit all green; the two integration modules
(10 tests) pass against a local Nextcloud (app-only, no MCP profile needed).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-02 23:09:46 +02:00
Chris CoutinhoandClaude Opus 4.8 d4dbf01b0a fix(search): gate verify-on-read file results on vector-index tag membership
Verify-on-read only checked file *accessibility* (file_accessible_by_id),
never tag membership, so a file removed from the `vector-index` tag (but
still readable) kept surfacing in semantic search, and stale points only
got evicted when they happened to rank in a search's top-K.

Rework `_verify_files` to gate on current `vector-index` tag membership via
a single batch `find_files_by_tag(tag, mime_type_filter="application/pdf")`
REPORT per search (plus a one-shot EXCLUDED_TAGS lookup for exclusion-wins
parity) — exactly what the scanner indexes. A file is kept iff it is in that
set, so untagged / deleted / excluded files drop out immediately and the
existing eviction wiring reclaims their Qdrant points. The gate is strict
for all file results, own and shared. Mirrors the batch-fetch-and-intersect
shape of `_verify_news_items` (one semaphore slot, fail-open on fetch error,
malformed-id keep).

- Promote the tag name to a `vector_sync_pdf_tag` Settings field (dynaconf
  env mapping VECTOR_SYNC_PDF_TAG) used by both scanner and verifier;
  drop the scanner's direct os.getenv.
- Expose `find_files_by_tag` on NextcloudClientProtocol.
- Rewrite the file-verifier unit tests (tagged/untagged/deleted/excluded/
  fail-open/non-numeric); update the ACL + verify-on-read integration tests
  to seed tagged PDFs.
- Amend ADR-019 and the configuration.md verify-on-read latency budget.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-06-02 21:14:44 +02:00
Chris Coutinho a92f6260fb Merge remote-tracking branch 'origin/master' into feat/decomp-hook-points
# Conflicts:
#	nextcloud_mcp_server/vector/scanner.py
2026-05-29 18:31:05 +02:00
Chris CoutinhoandClaude Opus 4.8 29500bea7e fix: PR #813 review — cap unified_search multi-type pool; document deck self-only
🟡 Performance: unified_search's _execute sorted but did not cap the merged
multi-doc_type pool, so N doc_types each fetched at search_limit sent
N*search_limit candidates into verify-on-read (one Nextcloud round-trip each).
Cap to search_limit*2 after the sort, matching vector_search, nc_semantic_search
and the viz_routes pattern — bounding verification cost to O(2*search_limit)
regardless of how many doc_types are requested.

🟡 Consistency: _get_deck_metadata_from_qdrant is the one internal Qdrant lookup
that uses a raw user_id filter instead of build_ownership_filter. This is not a
bug — deck cards are a documented cross-user gap (the Deck API is per-user, so
cross-user context can't be fetched with the caller's credentials) — but the
inconsistency was unexplained. Added a comment documenting the deliberate
self-only scope.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 17:49:21 +02:00
Chris CoutinhoandClaude Opus 4.8 350358b802 fix: PR #813 review — shared-file context in MCP tool path + viz over-fetch cap
🟡 Important: nc_semantic_search's include_context branch did not forward
accessible_owners to get_chunk_with_context, so context expansion for shared
files stayed self-only, found nothing in Qdrant, and silently fell back to the
plain excerpt. Forward accessible_owners (the per-file file_accessible_by_id
gate still enforces access).

🟡 Performance: auth/viz_routes.py's multi-doc_type branch sorted but did not
cap the candidate pool before verify-on-read, so N doc_types × limit*2 went
into verification (N× the Nextcloud round-trips). Cap to limit*2 after the
sort, matching server/semantic.py and the cross-app branch.

Also clear the SonarCloud gate (new_duplicated_lines_density 5.1% > 3%) the
ACL wiring introduced: extract the duplicated /api/v1 client-resolution +
owner-expansion + verify-on-read block from unified_search/vector_search into a
shared _search_with_acl helper, define a constant for the repeated
"Nextcloud host not configured" literal (S1192), and reword the access_filter
move_to_end comment so it isn't misread as commented-out code (S125) while
adding the other-owner count to its debug log (review nits).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 17:16:23 +02:00
Chris CoutinhoandClaude Opus 4.8 8deb48e6fa fix: address PR #813 review round 4 (log leak, cross-user chunk ctx, algo, overlap)
1. Don't log unverified result titles: both search algorithms logged top-5
   titles at DEBUG before verify-on-read; with owner-level share expansion the
   unverified set can contain other users' docs. Algorithms now log a count
   only; the verifying callers (server/semantic, viz_routes, api/visualization)
   log verified titles after verify-on-read.

2. Cross-user FILE chunk context: get_chunk_with_context + the Qdrant chunk
   helpers now take accessible_owners and use build_ownership_filter. For files
   the expanded scope is honoured only after a per-file file_accessible_by_id
   check (accessible_owners is owner-level, so the gate prevents a one-file
   share recipient from reading any of the owner's cached chunks). note/deck/
   news stay self-only (per-user APIs) — a documented gap. Both chunk endpoints
   pass accessible_owners.

3. Algorithm usage: SemanticSearchAlgorithm is not dead (it backs the dense-only
   option on the viz/API surfaces); added a clarifying comment in server/
   semantic.py. Additionally wired accessible_owners + verify-on-read into the
   /api/v1 search routes (unified_search, vector_search) so the astrolabe
   surface is ACL-aware too — degrading gracefully to self-only/unverified for
   non-provisioned callers instead of 401.

4. Overlapping conditions: build_ownership_filter no longer lists self in the
   owner_id MatchAny branch (self is already covered by the user_id branch);
   the owner_id branch carries only the OTHER owners.

Tests: build_ownership_filter dedup + chunk-bbox filter-shape updates; new
ACL-aware get_indexed_doc_types, cached-chunk lookup, and end-to-end cross-user
file chunk-context (recipient gets the chunk, non-recipient denied) tests.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 16:55:00 +02:00
Chris CoutinhoandClaude Opus 4.8 423d0a1758 fix: address PR #813 latest review (ACL-aware doc-type discovery, robustness)
- get_indexed_doc_types: add optional accessible_owners param and reuse
  build_ownership_filter so cross-user doc-type discovery matches the real
  search scope (was self-only / ACL-blind); docstring documents the self-only
  default. Covered by test_get_indexed_doc_types_is_acl_aware.
- access_filter: build_ownership_filter now omits the owner_id branch entirely
  for an empty owner set instead of relying on undocumented MatchAny(any=[])
  semantics; updated the empty-list unit test accordingly.
- access_filter: make the uid_owner/owner share-owner extraction explicit
  ("absent, not empty") to avoid skipping on a falsy-but-present field.
- access_filter: add an operator note that pre-owner_id points need a re-index
  to surface to share recipients (ACL search is a no-op for legacy data).
- verification/webdav: lock the file_accessible_by_id(scope="") contract with a
  targeted multi-user test (owner + recipient True, non-recipient False).
- viz_routes: comment that verify-on-read eviction runs inline by design (no
  lifespan task group available on the Starlette route).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 14:57:34 +02:00
Chris CoutinhoandClaude Opus 4.8 cafbfd15a9 fix: address PR #813 review (owner_id index, cache bound, explicit param)
- vector/qdrant_client.py: add owner_id to _PAYLOAD_INDEX_FIELDS (BLOCKING).
  Every search applies MatchAny(key="owner_id", ...); without a keyword index
  Qdrant full-scans the collection and may 400 on Qdrant Cloud strict mode.
  _ensure_payload_indexes is idempotent so existing collections migrate at
  startup.
- search/access_filter.py: bound the process-global _owners_cache with an LRU
  cap (was one unbounded entry per active user, never evicted); document the
  owner-level over-fetch limitation (a prolific sharer floods the recall
  buffer with ghost candidates that verify-on-read drops, with no second
  Qdrant pass) as a TODO toward per-file filtering.
- search/algorithms.py + semantic.py + bm25_hybrid.py: promote
  accessible_owners from **kwargs to an explicit keyword-only parameter on the
  SearchAlgorithm ABC and both implementations, so a misspelled keyword is a
  type error rather than a silent fall back to self-only scope.
- search/verification.py: document that _verify_files now verifies by global
  file id (WebDAV SEARCH), not by path.
- tests/unit/search/test_access_filter.py: add cache-hit, TTL-expiry,
  failure-not-cached, and LRU-bound tests.

Bumps the astrolabe submodule with the matching #89 review fixes.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 13:28:45 +02:00
Chris CoutinhoandClaude Opus 4.8 d883052fb8 feat: add opt-in MCP decomposition hook points (design §10)
Adds the seven §10.2 hook-point modules + five env vars so Astrolabe Cloud can
offload document processing to the external document-processor / embedding
gateway. Purely additive: with every setting unset the server behaves exactly
as today, so self-hosters are unaffected (Deck #92).

Hook points (all default to current monolith behavior):
- config: EMBEDDING_PROVIDER, INGEST_MODE, STATUS_BACKEND,
  COLLECTION_METADATA_SOURCE, FACT_EVENT_EMITTER (+ supporting settings),
  validated in Settings.__post_init__ (fail-fast STATUS_BACKEND=local with
  INGEST_MODE=external); shared canonical.py.
- vector/payload_keys.py + acl_hash.py: cross-impl NAMESPACE/point_id (§2.2)
  and BLAKE2b-128 ACL hash (§11), pinned by fixtures shared with the
  document-processor repo.
- embedding/gateway_client.py: OpenAI-compatible GatewayProvider authenticating
  via M2M OIDC client-credentials (separate realm); manual-only registry entry.
- vector/collection_metadata.py: sentinel-point / API metadata source with env
  fallback.
- vector/queue/: hexagonal ingest producer ports + memory/NATS adapters
  (Postgres seam); INGEST_MODE=external publishes mcp.ingest.requested.{tenant}
  instead of the in-memory stream and skips the in-process processor pool. The
  lifespan becomes a composition root across both deployment branches.
- vector/queue/status.py: STATUS_BACKEND=bus subscriber feeding a StatusStore
  the vector-sync status endpoint reads.
- admin/payload_backfill.py: POST /api/v1/admin/payload-backfill (admin scope);
  processor writes the new payload keys; query-side ACL pre-filter gated behind
  ACL_PREFILTER_ENABLED (default off).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 13:13:25 +02:00
Chris CoutinhoandClaude Opus 4.8 b1fac2d7a8 fix(search): address PR #813 review (viz verify-on-read, owners cache, docs)
- viz_routes: run verify_search_results before returning results. After the
  accessible_owners expansion the viz can surface OTHER users' shared docs, so
  it must drop ones the caller can no longer access (revoked share) — same as
  the nc_semantic_search tool path. (Blocking review item.)
- access_filter: cache list_accessible_owners per user for 30s to keep the OCS
  shares round-trip off the search hot path (failures aren't cached); document
  the single-page OCS limitation; add a clear_accessible_owners_cache() test
  helper. Comment the empty-accessible_owners MatchAny([]) edge case.
- verification: comment why cross-user eviction is a deliberate no-op (eviction
  is scoped to the querying user's id, so a recipient's revoked access never
  deletes the owner's points; the recipient self-heals via accessible_owners).
- algorithms: declare SearchResult.original_score (set by the viz route) so the
  now-precisely-typed result list type-checks.
- tests: cross-user eviction-no-op safety test; autouse owners-cache reset in
  the access_filter + shared-search tests; replace async-no-await qdrant fakes
  with AsyncMock (clears SonarCloud S7503).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-29 02:15:44 +02:00
Chris CoutinhoandClaude Opus 4.8 bf35200bab fix(search): verify shared files by global file id (ACL-aware)
The ACL-aware vector filter (PR #813) expands a user's search to documents
whose owner shared them, but verify-on-read still re-checked each file by
PATH under the *searching* user's WebDAV root. Nextcloud mounts received
shares at the recipient's root by basename, so a nested shared file (e.g.
owner's /docs/report.pdf) 404s for the recipient and was silently dropped —
defeating the filter for everything but root-level files.

Verify files by their global Nextcloud file id instead (the file doc_id IS
that id): WebDAVClient.get_file_info_by_id was insufficient (the dav/meta
endpoint only resolves the user's own storage, not shares), so add
WebDAVClient.file_accessible_by_id which runs a WebDAV SEARCH over the user's
whole tree (incl. mounted shares) filtered on oc:fileid. Empirically this
resolves owned, directly-shared, and folder-shared files; an empty result is
a definitive drop, transport errors are kept as transient.

- search/verification.py: _verify_files now checks file_accessible_by_id.
- client/webdav.py: add file_accessible_by_id (SEARCH by fileid).
- tests/integration/test_acl_owner_filter.py: filter matrix vs real Qdrant.
- tests/integration/test_acl_shared_search.py: real-Nextcloud share -> search.
- tests/integration/test_verify_on_read.py: nested shared file kept for the
  recipient; unshared file dropped.
- tests/unit/search/test_verification.py: id-based verifier semantics.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
2026-05-28 23:05:40 +02:00
Chris CoutinhoandClaude Opus 4.7 37db82613d feat(search): ACL-aware vector filter via Nextcloud Shares lookup
The vector index has always been strictly per-user: every Qdrant payload
carries a `user_id` and the search filter is `user_id == querying_user`.
A file Alice indexed cannot be discovered by Bob even if she has shared
it with him — Bob would have to re-index it under his own user_id to
make it searchable, which means duplicate index entries for every share
recipient.

Switch to ownership-with-ACL-expansion:

- New `nextcloud_mcp_server.search.access_filter` module:
  - `list_accessible_owners(sharing_client, user_id)` calls the OCS
    Sharing API (`shared_with_me=true`) and returns
    `{user_id} ∪ {uid_owner of each share}`. Fails open to `[user_id]`
    so a misbehaving Sharing API doesn't black-hole search.
  - `build_ownership_filter(user_id, accessible_owners)` returns a
    Qdrant `Filter` whose `should` branch matches either the new
    `owner_id IN accessible_owners` field or the legacy `user_id` field.
    The legacy branch keeps points indexed before this change reachable
    without a migration backfill.
- Indexer payload (`vector/processor.py`) now writes `owner_id` alongside
  `user_id`. `DocumentTask` gains an optional `owner_id` field; today the
  scanner always runs as the owner so the processor falls back to
  `user_id`, but the field is plumbed so a future shared-with-me crawler
  can set the true owner without reshaping the payload contract.
- `SemanticSearchAlgorithm.search` and `BM25HybridSearchAlgorithm.search`
  accept `accessible_owners` via kwargs and use the new ownership filter.
  Default behaviour with no kwarg is unchanged (self-only).
- Both user-facing callers — the MCP tool path (`server/semantic.py`) and
  the visualization Starlette route (`auth/viz_routes.py`) — compute
  `accessible_owners` from the authenticated Nextcloud client before
  invoking the search algorithm. Eviction, scanner deletion, placeholder,
  and chunk-context paths intentionally keep the legacy `user_id`
  semantics (those are "operations on a specific user's records", not
  cross-user reads).
- 10 new unit tests in `tests/unit/search/test_access_filter.py` cover
  self-only default, owner expansion, dedup, fallback fields, OCS
  failure, and the legacy `should`-branch shape.

Pairs with cbcoutinho/astrolabe#89 — together they let an Astrolabe user
find content owners have shared with them without going through any
re-authorization flow or re-indexing.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-27 23:48:34 +02:00
Chris CoutinhoandClaude Opus 4.7 e0b7afb4b1 fix(embedding): instantiate BM25 singleton off the event loop
The ``BM25SparseEmbeddingProvider.__init__`` calls
``fastembed.SparseTextEmbedding(model_name="Qdrant/bm25")`` which
downloads ~50 MB of model weights from HuggingFace and loads them
into memory — observed >5 s wall-clock in production. The inference
methods (``encode_async``, ``encode_batch_async``) already wrap work
in ``anyio.to_thread.run_sync``, so the design intent is clearly to
keep FastEmbed off the event loop. That protection just didn't
cover the constructor.

Symptom in the Astrolabe Cloud per-tenant deploy (deck #102 smoke):
~30–90 s after a user enables semantic search, the pod tips into a
SIGKILL-restart cycle. Loki shows a single log line

  Initializing BM25 sparse embedding provider: Qdrant/bm25

followed by nothing else from the event loop until exitCode 137.
Kubernetes ``/health/live`` httpGet probe timeout=5s fires 6 times
in a row, kubelet kills the container, restart, repeat.

Fix: switch ``get_bm25_service()`` to an async accessor that wraps
the first-time construction in ``anyio.to_thread.run_sync``. Two
existing call sites (``vector/processor.py:603``,
``search/bm25_hybrid.py:123``) update to ``await``. Both are
already inside async functions so the await is free.

New unit test pins the invariant by monkey-patching
``BM25SparseEmbeddingProvider.__init__`` with ``time.sleep(1)`` and
asserting a concurrent ``anyio.sleep(0.05)`` finishes promptly —
the test fails if the constructor ever runs back on the event loop.

Same pattern exists in ``OllamaEmbeddingProvider.__init__`` (sync
``httpx.get`` health-check). Ollama isn't enabled in any current
deploy; filed as a follow-up.

Refs:
- Astrolabe Cloud deck card #102 (smoke discovery)
- Sibling fix #799 (NullPool for cross-loop-asyncpg, same class
  of "anyio bites you in production" bug)

Verified:
- ``uv run pytest tests/unit/`` — 1027 passed
- ``uv run ruff check`` clean on touched files
- ``uv run ty check`` clean on touched files
- New tests pass

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-17 19:33:24 +02:00
Chris CoutinhoandClaude Opus 4.7 665cb9b1eb refactor: convert f-string logging to lazy %-style format (G004)
Sweep all 1676 G004 violations across 112 files, converting
`logger.<level>(f"…{x}…")` to `logger.<level>("…%s…", x)`.

Why: ruff rule G004 was added to pyproject.toml to enforce lazy
%-style logging — defers formatting until the log level is enabled
and lets structured log tooling match the unformatted template.

Conversion preserves rendered output byte-for-byte:
- `{x}` → `%s` + `x`
- `{x!r}` / `{x!s}` / `{x!a}` → `%r` / `%s` / `%a`
- Format specs (`{x:.2f}`, `{x:>10}`) → `%s` + `format(x, 'spec')`
  (printf-style specs aren't 1:1 with Python format specs, so we
  delegate to `format()` to keep identical output)
- Literal `%` → `%%`
- Concatenated f-strings (`f"a {x} " "b"`) flattened
- Trailing kwargs (`exc_info=True`) preserved

Verified:
- `uv run ruff check --select G004` → 0 violations
- `uv run ty check -- nextcloud_mcp_server` → passes
- `uv run pytest tests/unit/` → 1010 passed

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-13 01:12:17 +02:00
Chris CoutinhoandClaude Opus 4.7 8f4f5c0079 fix(vector): address PR review round 16 — type-aware index check, comments
Detect pre-existing payload indexes with the wrong schema type in
`_ensure_payload_indexes`. The previous "field already in
existing_schema → skip" branch silently survived a collection migrated
from the int-doc_id era where `doc_id` is indexed as INTEGER, letting
`MatchValue(value="123")` searches keep failing with HTTP 400 on Qdrant
Cloud strict mode — exactly the production failure this PR was meant to
fix. New behaviour: compare `existing_schema[field].data_type` against
the declared type; on mismatch log a WARNING and append to
`failed_fields` so the consolidated end-of-function summary picks it up.
No auto-repair (operator intervention only — see docs/configuration.md
recovery procedure). New test exercises the doc_id-INTEGER scenario
end-to-end and asserts both the per-field WARNING and the summary line.

Clarify the `_verify_news_items` malformed-doc_id rationale: the news
API has no per-item endpoint, so a malformed doc_id genuinely cannot be
verified against the source of truth. We err toward false-positive
(keep) over false-negative (drop) — same conservative posture as
`_verify_notes` and `_verify_deck_cards`. The producer-side validation
is the real security boundary; the verifier is defence-in-depth. Both
the inline comment and the WARNING message now spell this out.

Add a TODO in `get_last_indexed_timestamp` flagging the O(N) cost on
every incremental sync tick. The previous single-page `limit=10_000`
silently bounded the scroll; paginating fixed correctness but made the
unbounded cost visible. The follow-up tracker (canonical TODO at
`api/visualization.py`) covers migrating the max-`indexed_at` to a
sentinel point or collection metadata for O(1) lookup.

Consolidate the duplicate non-numeric-doc_type TODOs at
`api/visualization.py:508` and `auth/viz_routes.py:570` into a single
canonical comment in `visualization.py`; `viz_routes.py` is reduced to
a back-reference. Removes the rot risk of "fixed in one place,
forgotten in the other." The canonical comment also references the
O(1) timestamp follow-up in `scanner.py`.

Document the `batch_size = 256` (qdrant_client.py) vs
`_DELETION_TRACKING_PAGE_SIZE = 1024` (scanner.py) split with
cross-referencing comments at each site: the smaller batch is for the
read-write backfill upsert path (Qdrant accepts ~256-point chunks
comfortably); the larger page is for read-only deletion-tracking
scrolls where no per-page write round-trip applies.

Replace `assert qdrant_client is not None` in `scan_user_documents`
with `cast(AsyncQdrantClient, qdrant_client)` plus an explanatory
comment. `assert` is silently elided under `-O`; `cast` is the
conventional zero-cost narrower for branches the type checker can't
infer from the surrounding `if not initial_sync` ternary.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-10 17:50:23 +02:00
Chris CoutinhoandClaude Opus 4.7 68506f96c5 fix(vector): address PR review round 15 — concurrency, pagination, stale coercion
Defer publication of `_qdrant_client` until after the in-lock backfill +
payload-index migration awaits complete. The fast-path check at the top of
`get_qdrant_client` reads the singleton without holding the init lock, so
publishing the constructed-but-unmigrated client let concurrent fast-path
callers fire filtered searches before `_ensure_payload_indexes` ran —
producing HTTP 400 ("Index required but not found") on Qdrant Cloud strict
mode. Local `provisional` is now used for every await inside the lock; the
global is assigned exactly once, last.

Replace the five hand-rolled `scroll(..., limit=10000)` calls in
`vector/scanner.py` (notes / files / news / deck-cards deletion tracking,
plus the timestamp scroll) with a single paginated `_scroll_all_points`
helper. The previous single-page cap silently dropped deletion-tracking
points beyond the first 10 k for any user past that threshold. Pagination
follows Qdrant's documented contract (loop until `next_page_offset is
None`) with a fixed per-page `_DELETION_TRACKING_PAGE_SIZE = 1024`.

Extract `_create_one_payload_index` from `_ensure_payload_indexes` to drop
its cognitive complexity below the SonarQube limit (17 → ≤ 15) without
losing the per-field error-containment rationale; every comment is
preserved verbatim on the helper.

Drop the stale `SearchResult.id` `int | str` comment and the redundant
`str(d)` coercion in `_verify_news_items` — the contract has been
str-only since the producer-side stringification landed earlier in this
PR.

Fix eight `doc_id=<int>` test calls in `test_chunk_context_offset_gate.py`
that violated the `doc_id: str` signature of `get_chunk_with_context`,
plus align `_make_result` in `test_verification.py` to coerce `id=str(...)`
matching the production contract — and update 30+ assertions from int
sets (`{1, 2, 3}`) to str sets (`{"1", "2", "3"}`) so the tests now model
the post-PR `SearchResult.id: str` reality end-to-end. Previously these
were masked by the `str(d)` coercion now removed from production.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-10 13:49:17 +02:00
Chris CoutinhoandClaude Opus 4.7 c5020d9629 fix(vector): address PR review round 14 — accurate offset-skip comment + news_item doc_id guard
Round-14 review surfaced one blocking and one important issue.

context.py: the comment justifying `skip_offset_lookup` claimed
chunk_start/end_offset weren't in _PAYLOAD_INDEX_FIELDS — round 13
indexed both as INTEGER, so the comment now actively misleads. Replace
with the real reason: an indexed chunk_index miss is canonical (both
paths hit the same Qdrant collection), and skipping the offset filter
avoids a redundant round-trip.

verification.py: hoist an is_valid_nextcloud_doc_id guard before the
`int(d)` cast in _verify_news_items, mirroring the boundary-validation
pattern already in _fetch_document_text. Coerce via `str(d)` because
SearchResult.id is `int | str` (D1 forward-compat widening). Malformed
ids now surface as a logger.warning rather than a generic debug line;
fail-open semantics are preserved.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-10 11:50:46 +02:00
Chris CoutinhoandClaude Opus 4.7 f9ad7dc52e fix(vector): address PR review round 12 — bool guard + strict doc_id validation
- _group_int_doc_ids: use type(value) is not int instead of isinstance,
  since bool is an int subclass and would otherwise stringify to
  "True"/"False" and corrupt legacy payloads on backfill.
- Replace doc_id.isdigit() guards in 5 boundary sites
  (api/visualization, auth/viz_routes, search/context note/news_item/
  deck_card branches) with a shared is_valid_nextcloud_doc_id helper
  that rejects "0", leading zeros, and Unicode digit classes
  (superscripts, Arabic-Indic, Devanagari) which pass isdigit() but
  cannot be valid MySQL AUTO_INCREMENT IDs.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 20:28:47 +02:00
Chris CoutinhoandClaude Opus 4.7 f3ce46da0f fix(vector): address PR review round 11 — broaden offset-skip gate, clarify ordering
- search/context.py: drop the doc_type=='file' guard on skip_offset_lookup
  so notes / deck cards / news items also bypass the unindexed offset
  fallback when chunk_index is available. Legacy chunk_index=None data
  still uses the offset path.
- vector/qdrant_client.py: clarify the backfill/_ensure_payload_indexes
  ordering invariant (backfill rewrites payload values only, never schema
  or indexes). Acknowledge OSS-vs-Cloud uncertainty in the 400-branch
  comment and the new-collection call-site comment.
- vector/scanner.py: hoist qdrant_client to function scope so the
  file-scroll block doesn't depend on a name bound inside the
  notes-scroll block.
- tests/unit/test_chunk_context_offset_gate.py: flip the note-with-
  chunk_index test to assert the offset fallback is skipped.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 17:59:41 +02:00
Chris CoutinhoandClaude Opus 4.7 fec1596784 fix(vector): address PR review round 9 — drop redundant guard, add init lock, test float doc_id path
Addresses the four 🟡 important findings from claude-bot review on PR #773:

str (non-Optional) and the guard would silently skip the Qdrant lookup
for an empty string. Removing the guard matches the type signature.

(`all([…, doc_id, …])` rejects None and empty string, plus
`assert doc_id is not None`). No code change needed.

`get_qdrant_client()` with a module-level `anyio.Lock`. Double-checked
locking keeps the steady-state hot path lock-free. Without this,
parallel cold-start callers could all enter the init block and run
`_backfill_doc_id_to_string` + `_ensure_payload_indexes` redundantly
(idempotent, but noisy). Pattern matches `auth/storage.py:2071`.

behavior with three tests covering the float-warning path (the gap
called out in the review), the str/None silent-skip paths, and the
int-grouping happy path.

Verification:
- ruff check / format: clean
- ty check -- nextcloud_mcp_server: clean
- uv run pytest tests/unit/: 969 passed

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 15:53:33 +02:00
Chris CoutinhoandClaude Opus 4.7 a27f738dbf fix(vector): tighten get_chunk_bbox_and_page_from_qdrant doc_id to str
🔴 Blocking finding from PR #773 latest review:
`get_chunk_bbox_and_page_from_qdrant` (`search/context.py:199`) still
declared `doc_id: int | str` and passed the raw value into
`MatchValue(value=doc_id)` at lines 239 and 256 without `str()`
coercion. After this branch's startup backfill normalises every Qdrant
`doc_id` payload to a string, an `int` filter would silently match zero
points — the function would return `(None, None)` instead of the
chunk bbox / page, and PDF highlight overlays would fail in production.

Take option 2 from the reviewer's two suggestions (annotation
tightening over inline coercion): the producer side of this PR has
already narrowed every other `doc_id` annotation to `str`, so this
function is the last hold-out. Pushing the contract into the type
system means `ty` will catch any future regression at the call site.

Production callers in `api/visualization.py` and `auth/viz_routes.py`
already pass `doc_id` (str) verbatim after the recent merge with
master's chunk_index-first refactor, so no caller-side changes needed.

Update the 9 calls in `tests/unit/test_chunk_bbox_helper.py` to use
string literals (`"42"` / `"99"` / `"1"`) instead of integers. The
mock doesn't validate `MatchValue` value types, so the tests passed
with stale int doc_ids today — but they were exercising a path
production no longer takes.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 14:32:33 +02:00
Chris Coutinho 9720a7e4fe Merge remote-tracking branch 'origin/master' into fix/qdrant-doc-id-keyword-index 2026-05-09 13:48:21 +02:00
Chris CoutinhoandClaude Opus 4.7 7ef8760d27 fix(chunk-context): address PR #767 review — extract bbox helper, fix page_number overwrite
Resolves both 🟡 important issues from the latest review:

1. `page_number` was unconditionally overwritten in `viz_routes.py:696` even
   when Qdrant's payload lacked the field, clobbering the value resolved
   from `chunk_context.page_number`. The new helper returns each field
   independently and both call sites only overwrite via `is not None`
   guards, matching the existing logic in `visualization.py`.

2. The ~60-line `if chunk_index is not None: ... else: ...` Qdrant scroll
   block was duplicated between `api/visualization.py` and
   `auth/viz_routes.py`. Extracted into `get_chunk_bbox_and_page_from_qdrant`
   in `search/context.py` alongside the existing private `_get_chunk_*_from_qdrant`
   helpers; both routes now share ~12 lines of caller code.

New unit tests at `tests/unit/test_chunk_bbox_helper.py` cover the indexed
and offset paths, the `(bbox, None)` regression case, and graceful
degradation on Qdrant strict-mode 400 (which also closes nit #4).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 13:29:22 +02:00
Chris CoutinhoandClaude Opus 4.7 c780f96d2b fix(chunk-context): address PR #767 review — drop dead PDF branch, redundant alias, add boundary tests
- Remove unreachable doc_type=="file" branch (and pymupdf/pymupdf4llm
  imports) from _fetch_document_text in search/context.py — the file
  path is short-circuited in get_chunk_with_context before reaching it.
- Drop the redundant `username = request.user.display_name` alias in
  auth/viz_routes.py; both Qdrant scroll filters now reference user_id
  consistently with the rest of the handler.
- Add TestAdjacentChunkBoundary in tests/unit/test_chunk_context_offset_gate.py
  covering chunk_index=0 (before-fetch gate closed) and
  chunk_index=total_chunks-1 (after-fetch gate closed) — the two
  off-by-one boundaries previously untested.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-09 00:07:51 +02:00
Chris CoutinhoandClaude Opus 4.7 47b0b737b6 fix(chunk-context): address PR #767 round-3 review — gate readability + legacy-fallback comment
- search/context.py: rename triple-negation gate condition to
  `skip_offset_lookup` named boolean for readability; convert new
  logger.warning to lazy %-style per repo convention.
- api/visualization.py, auth/viz_routes.py: add comment on the offset-only
  Qdrant scroll branch noting it is a legacy path for pre-astrolabe#75
  clients and degrades gracefully on Qdrant Cloud strict mode.

Reviewer item #2 (extracting the duplicated scroll block into a shared
helper) deferred to a follow-up issue per the reviewer's "not blocking"
framing.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 23:21:30 +02:00
Chris Coutinho 058463ee87 Merge remote-tracking branch 'origin/master' into fix/chunk-context-indexed-lookup
# Conflicts:
#	nextcloud_mcp_server/api/visualization.py
#	nextcloud_mcp_server/auth/viz_routes.py
2026-05-08 23:10:09 +02:00
Chris Coutinho 02744a50e0 Merge remote-tracking branch 'origin/master' into fix/qdrant-doc-id-keyword-index 2026-05-08 23:08:39 +02:00
Chris CoutinhoandClaude Opus 4.7 0b004f54bd refactor(vector): address PR #775 review round 3 — fix unused var, harden boundary lookup, rename trace span
- pdf_highlighter.compute_chunk_bboxes_batch: drop unused chunk_text
  destructure (SonarQube finding), and replace positional
  page_boundaries[page_num - 1] with a key-based next() match so
  reordered or non-1-indexed boundaries can't silently shift the bbox.
  Convert touched f-string log to lazy %s formatting.
- vector/processor: rename the trace_operation span from
  "vector_sync.generate_highlights" to "vector_sync.compute_chunk_bboxes"
  to match what the function actually does.
- Add test_compute_chunk_bboxes_handles_unordered_page_boundaries —
  reverses the boundaries list and asserts identical results to the
  in-order case, guarding the boundary-lookup regression class.
- Pin pre-push-review skill to sonnet model.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 23:05:31 +02:00
Chris CoutinhoandClaude Opus 4.7 92b2d50cd7 fix(vector): address PR review round 3 — sentinel guard, skip indexed fields, narrow types
- Add a fixed-UUID sentinel point written after a successful doc_id
  backfill so subsequent restarts retrieve it and short-circuit the
  O(N) scroll. Sentinel has no user_id/doc_id/doc_type payload so
  production search filters never see it.
- Pre-fetch payload_schema in _ensure_keyword_payload_indexes and
  silently skip fields that are already indexed; the "Created KEYWORD
  payload index" INFO log fires only on actual creation.
- Narrow stale `int | str` doc_id annotations to `str` across
  search/verification.py (BatchVerifier return type, per-verifier
  accessible sets, by_type / accessible_by_type / inaccessible
  collections); drop the now-redundant `type(d).__name__` prefix in
  the dropped-docs log.
- Align the backfill log message with the PR description's
  "Running doc_id backfill" promise; add a caller cross-reference to
  the wait=True comment.
- Fix _get_file_path_from_qdrant docstring (file_id is str, not numeric).
- Convert legacy `id=1` to `id="1"` in test_search_result.py to match
  the SearchResult.id: str annotation.

Three new unit tests cover sentinel-found, sentinel-written, and
skip-existing-index branches; existing backfill tests pass dimension
and explicit retrieve.return_value=[] for the no-sentinel path.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 22:59:46 +02:00
Chris CoutinhoandClaude Opus 4.7 45da876cf5 fix(chunk-context): propagate chunk_index=None through ChunkContext
Addresses the deferred half of PR #767 review issue 2: instead of just
documenting the "0/N misreport" with a logger.warning, propagate the
caller's None for chunk_index through the dataclass, position markers,
and response builders so callers can distinguish "unknown position"
from "actually chunk 0".

Changes:
- ChunkContext.chunk_index: int → int | None
- _insert_position_markers: chunk_index parameter is int | None; when
  None, renders "Chunk ?/N" instead of "Chunk 1 of N"
- get_chunk_with_context: drops the effective_chunk_index local entirely.
  Passes chunk_index (may be None) directly into both ChunkContext and
  _insert_position_markers, in both the Qdrant fast path and the
  doc-text fallback.
- Fast path: when chunk_index is None and chunk_text was retrieved via
  the offset lookup (notes/cards), skip the adjacent-chunk fetch.
  Index arithmetic from a default 0 would query the chunks at positions
  -1 and 1 even when the actual chunk is, say, 5/20 — silently producing
  wrong "before"/"after" text. Mark both sides as truncated instead.
- Drop the now-redundant logger.warning in the doc-text fallback (the
  response correctly communicates the unknown state via chunk_index=None).

Both existing response builders (`api/visualization.py:657` and
`auth/viz_routes.py:717`) already serialise `chunk_context.chunk_index`
unconditionally; `None` becomes JSON `null`. No route changes needed.

Adds 5 regression tests:
- ChunkContext.chunk_index propagates as None in fast path
- ChunkContext.chunk_index propagates as None in doc-text fallback
- Fast path with chunk_index renders "Chunk N of M" correctly
- _insert_position_markers renders "?/N" for None chunk_index
- _insert_position_markers renders explicit index when supplied

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 22:16:00 +02:00
Chris CoutinhoandClaude Opus 4.7 b5b4025bb4 fix(vector): address PR review round 2 — status branching, doc_id guard, doc restore
- _ensure_keyword_payload_indexes: distinguish 400 (schema conflict, warning)
  from other status codes (5xx/network, error) so a transient outage doesn't
  silently leave the collection unindexed.
- build_search_result_from_point: use .get("doc_id") + return None on missing
  instead of KeyError-crashing the search; reverse metadata merge order so
  payload-derived chunk_index/total_chunks win over caller-supplied extras.
- docs/configuration.md: restore the OpenAI/Mistral/Bedrock/Simple provider
  sections + reference-table rows that were dropped in the rebase. Reword
  the "Startup migrations" bullet to describe what the code actually does
  (no sampling — full scroll, zero writes when clean). Add operator note
  about the SemanticSearchResult.id TypeError path.
- tests: pytest.approx for float equality (Sonar python:S1244); coverage
  for non-400 → ERROR, payload={doc_id: None}, and missing doc_id key.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:37:10 +02:00
Chris CoutinhoandClaude Opus 4.7 80b27b1bc6 refactor(vector): address PR #775 review — drop unused payload key, fix resource leaks
- Drop chunk_bbox_page from Qdrant payload — viz endpoints never read it
  (page_number is the canonical PDF page field).
- Bump upsert BATCH_SIZE 10 → 100 now that payloads no longer carry PNGs.
- compute_chunk_bboxes_batch: move doc.close() into finally, replace
  unused stored_page_num with _.
- purge_page_images.py: switch to anyio.run() per project convention,
  and wrap AsyncQdrantClient in try/finally so the aiohttp session is
  always closed (the class doesn't implement async-context-manager).
- Decorate new bbox unit tests with @pytest.mark.unit so they run under
  the fast-feedback selector.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:32:12 +02:00
Chris CoutinhoandClaude Opus 4.7 51c1d42ea3 fix(chunk-context): address PR #767 round-2 review — gate, parity, doc
Latest reviewer comment flagged five items on top of the original PR. This
commit addresses every one:

🟡 1. Skip the offset-based Qdrant fallback for `doc_type=file` when
   `chunk_index` is supplied. Qdrant Cloud's strict mode rejects unindexed
   filter fields with HTTP 400, which `_get_chunk_from_qdrant` catches and
   logs at `logger.error` — masking real Qdrant problems in monitoring.
   Notes/cards keep the offset fallback (cheap, useful for legacy data).

🟡 2. Add a `logger.warning` and clarifying inline comment in the doc-text
   fallback path when `chunk_index` is None — surfaces the pre-existing
   "0/N misreport" so callers can detect it. Type-nullability propagation
   is deferred to a follow-up (out of scope for this hotfix).

🟢 3. Simplify `if chunk_text and doc_id_int is not None:` →
   `if chunk_text:` with an inner `assert doc_id_int is not None` for
   `ty` narrowing. The outer second clause was dead.

🟢 4. Add `doc_type` `FieldCondition` to the offset-based image lookup in
   both `visualization.py` and `viz_routes.py` for parity with the
   `chunk_index` branches.

🟢 5. Inline the `chunk_filter` local in `visualization.py` directly into
   the `must=[]` list (matches `viz_routes.py` style).

Adds `tests/unit/test_chunk_context_offset_gate.py` with three regression
tests covering the gate matrix: (file, with-index → skip offset),
(note, with-index → still tries offset), (file, no-index → still tries
offset). Lives at top-level rather than `tests/unit/search/` to side-step
a pre-existing circular-init issue in `nextcloud_mcp_server.search`.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:28:50 +02:00
Chris CoutinhoandClaude Opus 4.7 ee402ea00e feat(vector): replace inline page-image payloads with chunk_bbox (Deck #76)
Per-chunk PDF page renders (~150–700 KB base64 PNG each) were the dominant
disk consumer in production, repeatedly tripping `No space left on device:
WAL buffer size exceeds available disk space` on welcomed-malamute Qdrant.

Replace the inline highlighted_page_image / highlighted_page_number /
highlight_count fields with a small `chunk_bbox` field:
list[(x0, y0, x1, y1)] of normalized [0, 1] floats, ~32 bytes per chunk.
Astrolabe (the only known consumer) renders the highlight client-side as
a percentage-positioned overlay on top of the existing /api/v1/pdf-preview
render-on-demand path (cbcoutinho/astrolabe#76).

- pdf_highlighter: new compute_chunk_bboxes_batch() that reuses the
  existing _find_chunk_bbox text-search path, skipping all pixmap/PIL/PNG
  work.
- processor: store chunk_bbox + chunk_bbox_page in the Qdrant payload,
  drop highlighted_page_image + friends, drop the base64 import.
- visualization /api/v1/chunk-context and auth/viz_routes: read
  chunk_bbox instead of highlighted_page_image.
- vector/__init__: stop eagerly re-exporting `processor`/`scanner` —
  fixes a pre-existing circular import (search.algorithms ->
  vector.placeholder -> vector/__init__ -> processor -> scanner ->
  server.semantic -> search.bm25_hybrid -> search.algorithms partial).
  Test suite that was broken on master (test_bm25_hybrid.py et al.) now
  collects and passes.
- scripts/purge_page_images.py: ad-hoc, idempotent migration that
  delete_payload's the legacy keys from existing points. No reindex
  required; legacy chunks render the page with no overlay.

Pairs with cbcoutinho/astrolabe#76. Frontend handles missing chunk_bbox
gracefully, so this can land in either order.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:16:00 +02:00
Chris CoutinhoandClaude Opus 4.7 6aba589a6e fix(vector): address PR review — wait=True backfill, batched writes, search helper
Addresses reviewer feedback on PR #773:

- Backfill set_payload now uses wait=True to avoid a race where
  _ensure_keyword_payload_indexes builds the KEYWORD index before
  fire-and-forget writes have committed, leaving int payloads
  invisible to filters.
- Batch points sharing the same int doc_id into a single set_payload
  call (one document → many chunks → one round-trip instead of N).
- Drop _has_int_doc_id_sample short-circuit. The sample's false-negative
  window (clean first 256 results, ints further in) is gone; full scroll
  is the dominant cost on first run anyway.
- Simplify _ensure_keyword_payload_indexes: the "already exists" 400
  branch was dead code (Qdrant returns 200 on identical re-create); any
  400 now logs a warning and continues.
- search/context.py: comment the broadened file-type guard. Add explicit
  not doc_id.isdigit() checks at the top of note/news_item/deck_card
  branches in _fetch_document_text so malformed payloads surface as
  warnings instead of being swallowed by the broad except.

Also extracts build_search_result_from_point into search/algorithms.py
to deduplicate the 71-line payload-extraction loop shared by
SemanticSearchAlgorithm and BM25HybridSearchAlgorithm. This fixes
SonarQube's quality-gate failure (4.0% new-code duplication, max 3%).

Test coverage:
- 7 new unit tests for build_search_result_from_point covering missing
  payload, note/file/deck_card metadata, int doc_id coercion, and
  metadata_extras merging.
- Replace _has_int_doc_id_sample tests with clean-collection no-op and
  per-batch grouping tests.
- Update set_payload assertions from wait=False to wait=True.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 21:14:28 +02:00
Chris CoutinhoandClaude Opus 4.7 8457c427a5 fix(chunk-context): address PR #767 review — doc_type filter parity + tests
- Add `doc_type` FieldCondition to the chunk_index-path highlighted-image
  Qdrant filter in both `api/visualization.py` and `auth/viz_routes.py`,
  matching the shape of `_get_chunk_by_index_from_qdrant`. Safe today (the
  block is guarded by `doc_type == "file"` and Nextcloud file IDs are
  globally unique) but prevents a latent bug if other doc types start
  storing highlighted images.
- Demote `viz_routes.py` `ValueError` log from `error` to `warning` (lazy
  %-style) — `_parse_int_param` raises on user-supplied bad input, which
  is a 400 not a server error and shouldn't pollute error logs.
- Hoist `effective_chunk_index` to compute once at the top of
  `get_chunk_with_context`, removing two duplicate assignments.
- Add `test_file_doc_type_qdrant_miss_yields_fast_404` to the management
  endpoint tests, locking in the proxy-timeout fix contract.
- Add `tests/unit/test_viz_routes_chunk_context.py` mirroring management
  coverage for the OAuth-session route: param forwarding (chunk_index /
  total_chunks), `doc_type=file` fast 404, and 400 on invalid int params.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 20:50:27 +02:00
Chris CoutinhoandClaude Opus 4.7 719b3b5034 fix(vector): normalize doc_id to str + add Qdrant keyword payload indexes
Production was logging two cascading classes of Qdrant errors against the
welcomed-malamute deployment:

1. HTTP 400 — "Bad request: Index required but not found for \"doc_id\" of
   one of the following types: [keyword]". The collection was created via
   create_collection() with no payload indexes, so any FieldCondition
   filter on doc_id failed at the Qdrant layer (placeholder writes/reads,
   eviction, search context lookups).

2. Compounding the missing index, producers wrote a mix of int and str
   doc_ids: webhook_parser stringified node_id, scanner stringified note
   IDs, news IDs, and deck card IDs — but the file scanner passed the
   numeric file_id through unchanged. A keyword index would not have
   covered both kinds even if it had existed.

This change:

- Normalizes doc_id to str at every producer site (scanner.py:459,
  DocumentTask.doc_id, indexed_*_ids reads from Qdrant).
- Tightens str|int annotations to str across placeholder.py,
  eviction.py, search/verification.py, search/context.py,
  SearchResult.id, and the auth/api visualization endpoints.
- Defensive str() coercion on doc_id reads in semantic.py /
  bm25_hybrid.py / vector/visualization.py for the transition window
  before the backfill runs.
- Adds an idempotent startup migration in get_qdrant_client():
  - _ensure_keyword_payload_indexes creates KEYWORD indexes for
    doc_id, user_id, and doc_type (tolerates "already exists" 400s).
  - _backfill_doc_id_to_string scrolls the collection once and rewrites
    int doc_ids to str. Skipped after a quick sample shows no legacy
    int payloads.
- Public API preserved: SemanticSearchResult.id stays int via explicit
  int(r.id) narrowing in server/semantic.py — surfaces a TypeError with
  actionable context if a future doc_type ships non-numeric ids.
- Documents the startup migration in docs/configuration.md.

Tests: 11 new unit tests in tests/unit/vector/test_qdrant_client.py
covering happy path / already-exists / unrelated-400 for the index
helpers, and sample-skip / mixed-batch rewrite / payload=None edge cases
for the backfill. 889 unit tests pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-08 19:30:51 +02:00
Chris CoutinhoandClaude Opus 4.7 90458b6f08 fix(chunk-context): use indexed chunk_index lookup, fix close-after-use bug
Two related bugs surfaced in production while viewing chunks from the
Astrolabe frontend on the AWS-hosted MCP server:

1. PyMuPDF document closed: in _fetch_document_text the fallback path
   referenced pdf_doc.page_count after pdf_doc.close(), raising
   "document closed" and returning None. The slow PDF re-parse already
   completed but its result was discarded. Capture page_count into a
   local before close().

2. Slow/fragile chunk lookup: get_chunk_with_context filtered Qdrant by
   (chunk_start_offset, chunk_end_offset). Those fields are not part of
   the always-indexed payload schema, and with strict_mode enabled they
   yield 400 errors. Even with manually-added indexes the filter is
   fragile if a doc is re-chunked. Switch to chunk_index (always
   indexed) as the primary lookup key, falling back to offset-based
   lookup when callers don't supply it.

Plumb chunk_index/total_chunks through both the management API
(api/visualization.py) and the OAuth viz route (auth/viz_routes.py).
Apply the same change to the highlighted-image lookup so all four
chunk-context Qdrant queries prefer the indexed field.

Skip the slow PDF re-parse fallback entirely for files: when both the
chunk_index and offset Qdrant lookups miss, re-downloading and
re-parsing the source PDF won't find the chunk either, and routinely
exceeds 30s on large documents - which is the proxy timeout in
Astrolabe. Notes/cards keep the document-fetch fallback (cheap).

Removes dead code (_get_file_path_from_qdrant) that was only used by
the now-unreachable file fallback path.

Companion change in the Astrolabe app passes chunk_index from search
results through to the new endpoint params.

---

_This PR was generated with the help of AI, and reviewed by a Human_

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-07 10:58:48 +02:00
Chris CoutinhoandClaude Opus 4.7 104bbd390d refactor(search): address PR #750 round 12 review feedback
Six review items raised; four required code changes (#3, #4, #5, #6) and
two were resolved without code changes (#1 audit-only, #2 informational).

* search/verification.py — clarify the granularity asymmetry between the
  whole-batch fail-open (structural API failure) and the per-item fail-open
  (single bad stored doc_id). Future readers no longer need to derive why
  the two paths have different blast radii from the code alone.

* models/semantic.py — `dropped_document_count` description now explicitly
  notes that subtracting it from `verified_chunk_count` is not a meaningful
  operation, since the two fields count different units (documents vs
  chunks). Surfaces the unit mismatch where MCP clients actually see it.

* server/semantic.py — clarify the per-doc_type over-fetch comment so the
  N×2 pre-merge Qdrant cost (vs the cross-app branch's 1×2) is explicit
  rather than implied by "same 2× over-fetch budget".

* tests/unit/search/test_verification.py — add four new 429 unit tests
  (notes/news/files/deck) mirroring the existing 5xx-keeps pattern. Locks
  in that `_is_definitive_404_or_403` returns False for 429 so a future
  refactor cannot accidentally treat rate-limit responses as permanent
  revocations.

Audit confirmation for review item #1: all four `WebDAVClient.get_file_info`
call sites already handle the new `HTTPStatusError`-on-404 contract
(verification.py:156, tests/integration/test_rag.py:139,
tests/unit/client/test_webdav.py:153/190). No silent breakage internal to
this repo.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-02 00:26:06 +02:00
Chris CoutinhoandClaude Opus 4.7 1ed8362f78 refactor(search): address PR #750 round 11 review feedback
Three minor fixes from the round-11 review on PR #750:

- bm25_hybrid.py:209 — Comment said `doc_id` is `int (notes) or str (files)`,
  which is backwards. Notes, news_items, and deck_cards are stored as `str`
  (scanner.py:241, 666, 867); files are stored as `int` (scanner.py:425).
  Updated to point readers at scanner.py as the source of truth.

- verification.py:338 — Lowered the News-API 403/404 log line from `info`
  to `debug`. The News app being uninstalled or disabled is a predictable
  operational state (matching the other verifiers' debug-on-not-found
  paths), so this should not generate operator-dashboard noise. Transient
  errors immediately below stay at `warning` because they're unexpected.

- semantic.py:809 — `nc_get_vector_sync_status` was reading
  `document_receive_stream` via `getattr(..., None)`, but the attribute is
  guaranteed-defined on both `AppContext` and `OAuthAppContext` (as a
  field with `None` default). The defensive `getattr` masked typos that
  the eviction_task_group access at semantic.py:197-199 deliberately
  surfaces. Switched to direct access; the `if … is None:` value-check
  below is preserved (the attribute can legitimately be None before sync
  starts).

Items deliberately deferred (with rationale in the plan file):
- News verifier semaphore-hold during get_items (reviewer: "not required
  here, just worth tracking"; ADR already lists follow-ups).
- Hardcoded 2× over-fetch / VERIFICATION_OVERFETCH (TODO already in code).
- Integration test for the real Qdrant eviction filter (reviewer marked
  low-priority; type-preservation chain is unit-tested).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 23:00:42 +02:00
Chris CoutinhoandClaude Opus 4.7 15ffeca312 refactor(search): address PR #750 round 10 review feedback
- Tighten verify_search_results signature: client: Any → NextcloudClientProtocol
- Collapse 3 copy-pasted lock-justification comments to a single-line pointer
- Add logger.debug timing around the verify_search_results call site
- Add logger.debug timing around the unbounded news.get_items fetch
- Rename SemanticSearchResponse.dropped_count → dropped_document_count to make
  the chunks-vs-documents unit asymmetry explicit at the API boundary
- Drop unreachable duplicate 409 branch in WebDAVClient.move_resource

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 22:44:57 +02:00
Chris CoutinhoandClaude Opus 4.7 852ffa3678 refactor(search): address PR #750 round 9 review feedback
- Add concurrency-safety comments to per-verifier accessible sets in
  _verify_notes/_verify_files/_verify_deck_cards. Same rationale as
  accessible_by_type in verify_search_results: anyio is cooperative,
  set.add() is not an await point.
- Document 401 exclusion in _is_definitive_404_or_403 (treated as
  transient because it usually signals expired credentials, not
  permanent denial).
- Note multi-user compounding in the news verifier semaphore comment:
  N concurrent users hold N slots out of the shared budget.
- Log inaccessible doc ids with a type tag (e.g. "int:42" vs "str:42")
  so ghost-record logs disambiguate id types.
- Type the BatchVerifier alias and the four verifier function signatures
  with NextcloudClientProtocol instead of Any (algorithms.py exposes
  the right interface; the protocol is runtime_checkable).
- Surface verified_chunk_count vs dropped_count semantics in the
  nc_semantic_search tool docstring Returns block (chunks vs unique
  documents).
- Add comments to the two max_concurrent=20 sites in server/semantic.py
  noting they are intentionally distinct from
  settings.verification_concurrency (different request phases).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 22:18:03 +02:00
Chris CoutinhoandClaude Opus 4.7 3153c9dac4 refactor(search): pre-push review fixes for PR #750
Address findings surfaced by `pre-push-review` after the round 8 sweep:

- Add deck verifier symmetry tests (404, transient 5xx, unexpected
  exception, non-numeric metadata) so deck has the same shape as the
  notes/news/files verifiers. Also add unexpected-exception tests for
  the news and file verifiers, which had `except Exception` branches
  no test was reaching. Keeps the registry-style verifier coverage
  uniform.
- Modernize sibling field types in `VectorSyncState`, `AppContext`,
  and `OAuthAppContext` from `Optional[X]` to `X | None`, matching the
  `eviction_task_group: TaskGroup | None` field added in the round 8
  diff (resolves the inconsistency flagged by A6). The lone remaining
  `Optional` import is dropped.
- Reverse cross-reference direction in the verifier docstrings: the
  later-defined `_verify_deck_cards` and `_verify_news_items` now
  point at `_verify_notes` as the canonical hoisted-cast pattern,
  rather than `_verify_notes` forward-referring to verifiers defined
  below it.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:57:38 +02:00
Chris CoutinhoandClaude Opus 4.7 8a2626da6c refactor(search): address PR #750 round 8 review feedback
- Rename `verified_count` → `verified_chunk_count` to make the count
  granularity explicit at the field name (chunks vs unique docs).
- News verifier now fails open *per-item* on non-numeric stored doc_ids
  (matches notes/files/deck shape); a single bad id no longer rescues
  definitively-missing siblings from eviction.
- Update note-verifier integration test to use string doc_ids end-to-end
  to match production storage (scanner.py:241 stringifies note ids).
- Add regression test for the closed-task-group race guard in
  `verify_search_results` so the RuntimeError swallow is locked in.
- Convert remaining f-string logger calls in `server/semantic.py` to
  lazy %-style formatting (per repo convention).
- Document `evict_on_missing` as a developer/test flag (no env var) and
  flag the `get_file_info` 404→raise contract change in its docstring.
- Add a TODO(ADR-019) breadcrumb for the hardcoded 2× over-fetch so
  future tuning has a clear hook.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:40:30 +02:00
Chris CoutinhoandClaude Opus 4.7 3e981e647a refactor(search): address PR #750 round 7 review feedback
Round 7 raised 5 issues; this round addresses all of them and fixes
the underlying causes (not just the comments) where applicable so
they don't get re-flagged in future passes.

Critical:
- verified_count description in SemanticSearchResponse said "unique
  documents" but the value is len(verified_results), a chunk count.
  Description rewritten to accurately document chunk-level granularity
  AND explicitly call out the asymmetry with dropped_count (which
  counts unique (doc_id, doc_type) pairs).

- _verify_files false-eviction risk: the round-6 doc-only fix was
  re-flagged. Address at the source — widen WebDAVClient.get_file_info
  to raise HTTPStatusError on 404 (matching the rest of the client
  convention) and reserve None for the genuinely ambiguous
  malformed-PROPFIND case. _verify_files now keeps the result on None
  (cannot tell whether the file exists) and evicts only on a
  definitive HTTPStatusError 404. Tests updated; new test added for
  the malformed-XML keep-result path.

Non-critical:
- News verifier semaphore lifetime now explicitly documented: one
  slot held for one deduplicated fetch per search is the correct
  backpressure behaviour.

- Cross-reference comments in _verify_notes / _verify_deck_cards no
  longer claim "Mirrors X" pointing at functions defined later in
  the file; now use direction-neutral "parallel implementation in".

- accessible_by_type is mutated by concurrent run_verifier tasks; a
  comment explains why this is race-free under anyio's cooperative
  multitasking (distinct keys per task, no await between read and
  write) so a future reader doesn't add a redundant lock.

- Knock-on: tests/integration/test_rag.py wraps get_file_info in a
  try/except for the new contract.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:15:39 +02:00
Chris CoutinhoandClaude Opus 4.7 e8df6003c5 refactor(search): address PR #750 round 6 review feedback
Closes out the remaining nits flagged in the round-6 review.

Critical:
- _verify_files contract comment now enumerates all None-return cases
  (404 + malformed PROPFIND XML) and documents the false-eviction
  trade-off; self-healing via re-indexing recovers
- int(r.id) cast at the SemanticSearchResult boundary now raises a
  TypeError with explicit doc_type/value context instead of bubbling
  up as an opaque "Search failed: ..." McpError

Design observations:
- nc_semantic_search_answer docstring documents the per-note
  round-trip cost from the post-verification race guard
- News verification latency hint added to configuration.md
- SemanticSearchResponse exposes verified_count + dropped_count so
  short result pages on high-ghost-density indexes are
  distinguishable from genuine scarcity. verify_search_results now
  returns (kept, dropped_count); production caller and tests updated

Minor:
- Comment clarifies the .get() fallback in verify_search_results is
  defensive only (run_verifier always populates the entry)
- Eviction task-group guard narrowed from except Exception to
  except RuntimeError (the only documented failure mode of
  TaskGroup.start_soon on a closed group)
- Indexer logs a warning when a deck_card task is missing
  board_id/stack_id, surfacing data-quality issues at index time
  rather than at verification time
- New unit test covers the news verifier's non-numeric-id fail-open
  path (one bad doc_id keeps the entire batch)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-01 21:02:27 +02:00